Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_029013.1 Length=177688 Score E Sequences producing significant alignments: (Bits) Value seq6140 86.0 7e-12 >seq6140 Length=1248 Score = 86.0 bits (94), Expect = 7e-12 Identities = 131/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 78496 GTCAGGAGAGCGTAGGAGGCGATATTGAACGGCAACCCTAAGAAGACATCAACCGAACGC 78555 ||||| || || ||||| |||||||||||||||| || | |||| ||| | || ||| Sbjct 460 GTCAGCAGGGCATAGGATGCGATATTGAACGGCACGCCGAGAAAGATATCGGCGGAGCGC 519 Query 78556 TGATACCACTGTAGAGACAGTTTACCGTTGATTACGACGAACTGGAAGAAACAGTGACAC 78615 || || ||| || || || |||| | ||| ||||||||| | ||||| || Sbjct 520 TGGTAGAGCTGGCAGGAAAGCTTTCCGTCGGCCACGTAGAACTGGAACAGGCAGTGGCAG 579 Query 78616 GGACGCAATGCCATTTTATCCA-GATCAACAGGGTTCCATGCGGAAACGAT--GATCCCG 78672 || ||| ||||||| ||| | || | | || ||||||||||||||||| || ||| Sbjct 580 GGCGGCAGCGCCATTTCATCGACGAGC-GCCGGATTCCATGCGGAAACGATCAGACGCCG 638 Query 78673 CGA 78675 ||| Sbjct 639 CGA 641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568374081590400