Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1623 89.7 4e-13 >seq1623 Length=5066 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||||||| || || ||| ||||| || || || |||| ||| || || | || ||| Sbjct 120 ACCAAATGAAGAGTAGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGACCATCCTCA 179 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 || || || || ||||| |||||||| || || |||| ||| | | || ||||| | Sbjct 180 AGTTGCTTTCCGGCAAAGATAAGACGTTGTTGATCGGGGGGGATTCCTTCCTTGTCTTGG 239 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || || || | || | | ||||| ||| || |||| ||||| | || Sbjct 240 ATCTTGGTCTTTACGTTCTCGATGGTATCAGAGCCCTCAACCTCCAAGGTGATGGTCTTA 299 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || ||||| |||||||||||||||||||| Sbjct 300 CCAGTCAGGGTTTTAACAAAGATTTGCAT 328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429472282606565