Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_030940.1 Length=32637 Score E Sequences producing significant alignments: (Bits) Value seq1175 571 1e-158 seq1386 401 1e-107 seq256 273 5e-69 seq245 228 2e-55 >seq1175 Length=84778 Score = 571 bits (632), Expect = 1e-158 Identities = 909/1287 (71%), Gaps = 33/1287 (3%) Strand=Plus/Minus Query 1059 GAGGAAAGCAGCATGAAAGAACTCAGCCCATCGGCCGGGTCTGCGCTTTCCGGCGCTCCG 1118 |||||||||||||||| || | | || ||||| || |||||||||||| | || ||| Sbjct 17389 GAGGAAAGCAGCATGAGAGTGCATATCCAATCGGACGTGTCTGCGCTTTCTGACGTACCG 17330 Query 1119 CAGCAGTGGCACGACATCGACTGGTGTCGGGTCCAGCGGAATGTCCGGGGAATGCAGGTA 1178 || || ||||||| | | | ||| | | ||| | ||||| || || ||||| | Sbjct 17329 CAACACTGGCACGCCGTGCATTGGCGGCAGGTGGAACGGAACGTAAAAGGGGTGCAGATG 17270 Query 1179 CGGATTGCGAAGGCTTGTCGGGAAGGCAAATGGCGCAGGGTGAAGGCCCTACAACGGATG 1238 || ||||||||||| ||||||||||||||||||| |||||| ||||| ||||||||| Sbjct 17269 CGAATTGCGAAGGCAACGCGGGAAGGCAAATGGCGCAAGGTGAAAGCCCTGCAACGGATG 17210 Query 1239 CTGACCCGCTCGACGTCGGCCAGGTACCTGGCTGTACGGAGAGTCACTGAAAACCAGGGC 1298 ||||||||| || || || | || | || || | | || ||||| || || || Sbjct 17209 CTGACCCGCACGTTATCCGCAAAGTTATTAGCGGTGAAGCGTGTTACTGAGAATCAAGGT 17150 Query 1299 AAGCGCACGGCGGGAGTCGACCGCGTGCTCTGGGATACGCCTGACACCAAGTGGAAAGCG 1358 || |||||||| || || || | | ||| ||||| | ||||| || |||||| ||| Sbjct 17149 AAACGCACGGCAGGTGTAGATGGTGAGCTATGGGAGTCACCTGAAACGAAGTGG---GCG 17093 Query 1359 GCA-CAAG--GGTTGAAAAGGCGCGGGTACCAACCTCGGCCTCTACGGCGAGTGTTCATC 1415 ||| || || |||| |||| || || ||||| |||| | ||| |||| | || Sbjct 17092 GCAGTTAGCAGGATGAAGCGGCGTGGATATAGACCTCTGCCTTTGCGGAGAGTTTATATA 17033 Query 1416 CCGAAGTCGAACGGAAAGGAGCGCCCCCTGGGTATCCCGACCATGACTGACAGGGCAATG 1475 ||||| | || || ||| | ||||| | || || || |||||| || |||| ||| Sbjct 17032 CCGAAAGCAAATGGGAAGAAACGCCCTTTAGGGATACCCACCATGCTGGATCGGGCCATG 16973 Query 1476 CAGGCACTCTACCTGCTCGCTCTGTCGCCCATTGCAGAAACCACCGGCGATCCGAACAGC 1535 ||||| | ||| |||| | || ||| | | ||| | || | || |||||| Sbjct 16972 CAGGCTTTGTACTTGCTGGGGTTGGAACCCGTATCTGAATCGACGAGTGACCCGAACTCT 16913 Query 1536 TATGGCTTCAGGATCGAGCGATCCACGGCGGATGCAATGTCCCAGTTGTTCGTTTGCCTA 1595 ||||| |||||| | | || || || || ||||| |||||||| ||||||||| | || Sbjct 16912 TATGGGTTCAGGCGCAATCGTTCGACCGCAGATGCGATGTCCCAACTGTTCGTTTCCTTA 16853 Query 1596 TCCGGAAAGGCTTCGGCCCAATGGATACTGGAGGCGGACATACAAGGGTGTTTTGACCAC 1655 ||| || |||||||| | ||| ||||||| |||||||| || || || ||| || Sbjct 16852 TCCAAGAAAGCTTCGGCTCCTTGGGTACTGGAAGCGGACATCGCTGGCTGCTTCGACAAC 16793 Query 1656 ATCAATCATGACTGGCT--ACTGAACCATGTCCCCACGGACAAGGTGATCCTCCGGAAAT 1713 ||||| |||| ||||| | ||| ||||||| | ||| | | | || || |||| Sbjct 16792 ATCAACCATGCGTGGCTGAGCGGAA--ATGTCCCTATGGATACGACCGTTCTGCGTAAAT 16735 Query 1714 GGTTGAAGGCCGGCGTGATCCACAAAGGCCAGCTCCAGGCAACGGATGCTGGAACACCTC 1773 |||||||| ||||| ||||| | |||||| | | |||| || || || || || || | Sbjct 16734 GGTTGAAGTCCGGCCTGATCTATCAAGGCCGGTTTCAGGAGACCGAGGCCGGTACGCCGC 16675 Query 1774 AAGGCGGAATCATCTCGCCTACTTTGGCAAACATGGTGCTCGATGGCCTGGAATCACAGC 1833 |||| ||||| ||||| ||||| |||||||| || | | ||||| ||||| | |||| Sbjct 16674 AAGGAGGAATTATCTCTCCTACGTTGGCAAATGTGACGTTGAATGGCTTGGAAAC-CAGC 16616 Query 1834 TCAAGC-GA-CACCTGGG--CGTGACAAGG-------GCGAAGAAGCTGAAACTCAATGT 1882 | || || |||| || || | || || | |||||||| | ||||| Sbjct 16615 -CTGGCTGAGTACCTCGGTACGAAGTACGGCTGGAAAGCCATCAAGCTGAAGGTGAATGT 16557 Query 1883 GGTGCGCTATGCGGACGACTTCGTCATCACCGGTGTCTCTCCCGAGGTACTGGAGAAAGA 1942 |||||| || |||||||| ||||| || ||||| | ||| ||| | ||||| |||| Sbjct 16556 GGTGCGGTACGCGGACGATTTCGTGATTACCGGCGCCTCGAAAGAGTTGCTGGAACAAGA 16497 Query 1943 AGTCAAACCCTGGGTAGAGCAGTTCCTGGCGGTACGCGGGCTGCAGCTCTCTCTGGAGAA 2002 |||| || ||||| || ||||| || ||||| || |||| || || |||||| Sbjct 16496 GATCAAGCCTTGGGTGGAAACTTTCCTTGCAGTACGGGGATTGCAACTGTCCGAGGAGAA 16437 Query 2003 AACGCGGATCGCCCACATAGATCAGGGCTTCGACTTCCTCGGTTGGAACTTCCGCAAGTA 2062 |||||| || | | ||| || || ||||| || || || || |||||||||||||| || Sbjct 16436 AACGCGTATTGTACCCATGGACCACGGCTTTGATTTTCTGGGGTGGAACTTCCGCAAATA 16377 Query 2063 CAACGGGAAGCTTCTGATCAAACCCAGCCAGAAGAACGCGAAAGCGTTCTACGGCAAGGT 2122 | | |||||| | || ||||| || ||| |||| || ||| |||||||||| |||||| Sbjct 16376 CCAGGGGAAGTTGCTCATCAAGCCAAGCAAGAAAAATGCGCAAGCGTTCTATCGCAAGGC 16317 Query 2123 GAAGGAGGTCATCGAAACCAGCAGGACGGCAAGGCAAGAGGACTTGATCCGAAC-GCTGA 2181 ||||| ||||| || || | ||| | ||| |||| ||||| || | ||| | Sbjct 16316 CAAGGAAATCATCAGCACGCACAAGGCGGTGAAGCAGAAGGAGTTGAT-TGACCTGCTCA 16258 Query 2182 ATCCGATTCTGCGCGGCTGGGCGCTGTATCACCAGCCAGTGGTTGCCAAGCAAACGTTCA 2241 ||||| | | || |||||||||| ||||||| || || || ||||| |||| || Sbjct 16257 ATCCGGTATTACGAGGCTGGGCGCAGTATCACAGTCCGGTAGTAGCCAAAGCGACGTACA 16198 Query 2242 GCCGCATGGACAACAGAGTGTTTCTCA---AGCTCTGGCGTTGGGCGAAACGGCGGCACC 2298 ||||| |||| | | |||| ||| | ||||||| ||| |||||||||| || | Sbjct 16197 GCCGCCTGGAGACC---CTGTTGTTCAGGGCGATCTGGCGGTGGTCGAAACGGCGTCATC 16141 Query 2299 CGAACAAG-TCACTGGATTGGATCAGG 2324 |||||||| ||| | | ||||||||| Sbjct 16140 CGAACAAGAACACCGCA-TGGATCAGG 16115 Score = 253 bits (280), Expect = 4e-63 Identities = 384/537 (72%), Gaps = 32/537 (6%) Strand=Plus/Minus Query 416 GTTGTGCGACCAACGGTAGCCTAGGGAAACGTGCGTTGCTGGTAACGGCAGGGTGCGAAG 475 ||| | |||| ||| |||||||||||| || |||||||||||||||||| | ||| |||| Sbjct 18080 GTTATACGACTAACAGTAGCCTAGGGAGACATGCGTTGCTGGTAACGGCGGCGTGTGAAG 18021 Query 476 CTTTCCCGACAACGTAGCCCCC--GCGA-GGGTGCGAATTCACCGTGAGGTGAACCGCAG 532 |||||| ||||| ||| ||||| || | |||| | | | ||| |||| || | || Sbjct 18020 CTTTCCTGACAATGTATCCCCCCAGCAATGGGTACCTACCCGCCGCGAGGCGA---GTAG 17964 Query 533 AGGG----TCGGAGTAGC-ACCGACCCAAGGCGCTAGGCTGACTGGTACGGGCAACCTAG 587 || || ||| || || | | ||| ||||||||| |||||| ||| || || Sbjct 17963 GTGGAAACTCCGAGCAGTGACGGGGTCGAGGGGCTAGGCTGGCTGGTATGGGTAATTTAA 17904 Query 588 GTGAACTGCTGATAAACACCGTAAGGATTGACGAGCCAAAGCTGCTGACAGGCTCGAACC 647 ||||| | ||| |||| |||||| ||||| | |||||| |||||| ||||| | |||| Sbjct 17903 GTGAATCGTTGA-AAACTTCGTAAGCATTGAGGTGCCAAAACTGCTGTCAGGCACTAACC 17845 Query 648 AAAA-GGTACGTGGTCGGTTATCTCCG-TAGGTCGTGGAGATACGTCGCCTTCAGACCAC 705 |||| |||| |||| || ||| |||| | || | | |||||||| | || |||| Sbjct 17844 AAAACGGTATGTGGCTGGATAT-TCCGCTCAATCCTCGGAATACGTCGTCATCGAGCCAC 17786 Query 706 CGGTGAAAAGGCAGGTCCTAACCCAGTCGTGTGACAGTCAGGGAACGTGGTAAGCCCGTA 765 ||| ||| || | | |||||||| ||||||||| | ||||||||||| || |||| Sbjct 17785 CGGAGAATAGACGGACCCTAACCCGGTCGTGTGATAAATAGGGAACGTGGAAAACCCGAC 17726 Query 766 TCGCCGCCC-----------TCGG-----GGCAGGGGAGCCGTAAGGCGAACTGTTGGCG 809 || |||||| |||| |||||| | ||| ||| | ||||||| | Sbjct 17725 TCTCCGCCCCTTCCAGAGTATCGGAAGAAGGCAGGCAACCCGCGAGGGAAGCTGTTGGAG 17666 Query 810 GTGCGGGTATGGGATCGCAGAGAAAGCGAACGCCAGGCTGTAATCGTCTGGATAGGGGTT 869 | ||||| |||||| |||||||||||| ||| ||||||||| || |||||||| || Sbjct 17665 GAGCGGGCATGGGAGGATAGAGAAAGCGAATGCCGGGCTGTAATGGTTCGGATAGGGATT 17606 Query 870 -GGAACATCACCCCACGGGAAACCGGGCAGACTTCTGCGTGGTCTTTCGTCGCAAGA 925 | | ||| || |||| | |||||||||| |||||| ||||||||||| Sbjct 17605 CAGGCTTTGTCCCAACCCGAAAGGGTGCAGACTTCTATCTGGTCTATCGTCGCAAGA 17549 Score = 96.9 bits (106), Expect = 7e-16 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 2768 AGGCTTGAGCCGTATGCGTTGAAAGGCGCACGTACGGTTCTTAgggggggATGGGCCAGC 2827 ||||||||||||| |||| |||||| |||| | |||||||||||||||| |||||||||| Sbjct 15641 AGGCTTGAGCCGTGTGCGATGAAAGTCGCAAGCACGGTTCTTAGGGGGGAATGGGCCAGC 15582 Query 2828 AATGGCCCATCCCCACCC 2845 ||||||| | || |||| Sbjct 15581 AATGGCCTGTTCCTACCC 15564 >seq1386 Length=28181 Score = 401 bits (444), Expect = 1e-107 Identities = 954/1412 (68%), Gaps = 56/1412 (4%) Strand=Plus/Minus Query 1170 ATGCAGGTACGGATTGCGAAGGCTTGTCGGGAAGGCAAATGGCGCAGGGTGAAGGCCCTA 1229 |||||| | || | ||||||| | |||||| | |||||||||||||| ||| | Sbjct 11697 ATGCAGATTCGTTTAACGAAGGCAACACAGGAAGGTGACTGGCGCAGGGTGAAAGCCTTG 11638 Query 1230 CAACGGATGCTGACCCGCTCGACGTCGGC-CAGGTAC-CTGGCTGT---ACGGAGAGTCA 1284 || ||| ||||||||||||| || || || | ||||| || |||| || | Sbjct 11637 CAGCGGTGGCTGACCCGCTCGT--TCAGCGCAAAAGCGCTGGCAGTTAAACGG---GTGA 11583 Query 1285 CTGAAAACCAGGGCAAGCGCACGGCGGGAGTCGACCGCGTGCTCTGGGATACGCC-TGAC 1343 | || || || || ||||| || || || || ||||| | | ||||| ||||| | | Sbjct 11582 CAGAGAATCAAGGTAAGCGTACCGCAGGCGTAGACCGGCAGTTATGGGAAACGCCGTCGC 11523 Query 1344 ACCAAGTGGAAAGCG---GCACAAGGGTTGAAAAGGCGCGGGTACCAACCTCGGCCTCTA 1400 | || | | ||| || || |||| | | ||| |||| | ||| | ||| ||| Sbjct 11522 AGAAATTCGCG-GCGATTGCGCA---GTTGGAGAAGCGTCGGTATCGACCCCTGCCACTA 11467 Query 1401 CGGCGAGTGTTCATCCCGAAGTCGAACGGAAAGGAGCGCCCCCTGGGTATCCCGACCATG 1460 ||| | || | ||||| || | || || |||||||||||| |||| |||||||||||| Sbjct 11466 CGGAGGGTTTATATCCCCAAAGCCAATGGGAAGGAGCGCCCCTTGGGCATCCCGACCATG 11407 Query 1461 ACTGACAGGGCAATGCAGGCACTCTACCTGCTCGCTCTGTCGCCC--ATTGCAGAAACCA 1518 | || | || |||||||| | || |||| || || || |||| ||||| Sbjct 11406 AAAGATCGAGCCATGCAGGCGTTGTATTTGCTGGCGCTTGATCCGGTATTG--GAAACGG 11349 Query 1519 CCGGCGATCCGAACAGCTATGGCTTCAGGATCGAGCGATCCACGGCGGATGCAATGTCCC 1578 | || ||||| ||||| || ||| || || ||||| ||||||||| || Sbjct 11348 TGAGTGACCCGAATTCTTATGGTTTTCGGAAAAGCCGCTCAACGGCCGATGCAATGAGCC 11289 Query 1579 AGTTGTTCGTTTGCCTATCCGGAAAGGCTTCGGCCCAATGGATACTGGAGGCGGACATAC 1638 || | ||||| | | ||| | | |||||||||||||| ||||||| ||||| || Sbjct 11288 AGATATTCGTAAGAATGTCCCAGAGGACTTCGGCCCAATGGGTACTGGATGCGGATATTG 11229 Query 1639 AAGGGTGTTTTGACCACATCAATCATGACTGGCTACTGAACCATGTCCCCACGGACAAGG 1698 |||| | || || ||||||| || |||||| | | ||||||| || ||| || Sbjct 11228 AAGGTTTCTTCGATAACATCAACCACGACTGGATGATTGACCATGTTTGCATGGATAAAT 11169 Query 1699 TGATCCTCCGGAAATGGTTGAAGGCCGGCGTGATCCACAAAGGCCAGCTCCAGGCAACGG 1758 |||| || ||||| |||||||| |||| ||| | ||| || | | |||||| Sbjct 11168 TGATTCTTCGGAAGTGGTTGAAATCCGGGGTGGTTCACCGGACGCAATTGCTGGCAACCA 11109 Query 1759 ATGCTGGAACACCTCAAGGCGGAATCATCTCGCCTACTTTGGCAAACATGGTGCTCGATG 1818 || |||||||| || ||||| |||||| ||| | |||||||| | ||| ||| Sbjct 11108 CAGCGGGAACACCGCAGGGCGGCATCATCAGCCCTGCATTGGCAAATTGGACGCTGAATG 11049 Query 1819 GCCTGGAATCACAGCTCAAGCGACACCTGGGCGT--GAC----AAGGGCGAAG------A 1866 | |||||||| | || | |||||| || || || || | |||| | Sbjct 11048 GACTGGAATCGGAACTGATCGAACACCTCGGTGTCCGATTCGGAACGTCGAAATTCCAAA 10989 Query 1867 AGCTGAAACTCAATGTGGTGCGCTATGCGGACGACTTCGTCATCACCGGTGTCTCTCCCG 1926 |||| ||| | ||| ||||| || |||||||| ||||| | ||| ||| || | | Sbjct 10988 AGCTAAAAGTTGGTGTCGTGCGATACGCGGACGATTTCGTGGTAACCAGTGCTTCACAAG 10929 Query 1927 AGGTACTGGAGAAAGAAGTCAAACCCTGGGTAGA-GCAGTTCCTGGCGGTACGCGGGCTG 1985 || | ||||| | |||| || || ||| |||| ||| ||||| || || |||||| Sbjct 10928 AGTTGCTGGAAACAGAAATCCGGCCATGGATAGAAGCA-TTCCTCGCAAAGCGTGGGCTG 10870 Query 1986 CAGCTCTCTCTGGAGAAAACGCGGATCGCCCACATAGATCAGGGCTTCGACTTCCTCGGT 2045 | || || | || || || |||| || || || || ||||| |||||||| || Sbjct 10869 CGACTGTCGCAGGCCAAGACCAATATCGTACATATTGACCAAGGCTTTGACTTCCTTGGG 10810 Query 2046 TGGAACTTCCGCAAGTACAACGGGAAGCTTCTGATCAAACCCAGCCAGAAGAACGCGAAA 2105 ||||| ||||| || ||| | || ||||| || |||||||| || ||||| |||| |||| Sbjct 10809 TGGAATTTCCGGAAATACGAGGGAAAGCTGCTCATCAAACCGAGTCAGAAAAACGTGAAA 10750 Query 2106 GCGTTCTACGGCAAGGTGAAGGAGGTCATCG--AAACCAGCAGGACGGCAAGGCAAGAGG 2163 |||||||| | ||| ||| | |||| |||| ||| | |||||||| ||| |||| Sbjct 10749 GCGTTCTATGAAAAGTTGAGGAAGGTGATCGGCGAACAA--TTGACGGCAAAGCAGGAGG 10692 Query 2164 ACTTGATCCGAACGCTGAATCCGATTCTGCGCGGCTGGGCGCTGTATCACCAGCCAGTGG 2223 | |||||||| |||||||||| | || || |||||||||| |||||| || || | Sbjct 10691 ATTTGATCCGGCTGCTGAATCCGGTGCTACGAGGCTGGGCGCAATATCACAGTCCCGTAG 10632 Query 2224 TTGCCAAGCAAACGTTCAGCCGCATGGACAACAGAGTGTTTCTCAAGC-TCTG--GCGTT 2280 |||||||||| ||||| || || || | || | || || ||| | | | Sbjct 10631 TTGCCAAGCAGGCGTTC--TCGTATATGCAGTCG-CTGCTATTCTGGCGACTGATGAGGT 10575 Query 2281 GGGCGAAACGGCGGCACCCGAAC-AAGTCACTGGATTGGATCAGGAGGCGATATTTCCGG 2339 |||| || || | ||||||||| ||| || |||||||| | | | ||| | ||| Sbjct 10574 GGGCCAAGCGCAGACACCCGAACAAAGATGCT-GATTGGATTCGCAAGAAATACTGGCGG 10516 Query 2340 ATTCACGGGGACAAGACTTGGGTGTTCGCT-ACCACGGTGCTGGAAAGCA--ACGGTAAG 2396 | ||| ||| | ||||||||| ||| ||| || |||| | |||| Sbjct 10515 ACAATCGGTGACCGAAATTGGGTGTTTGCTGTGGACGTTGTCACAAAGGATGGCGGT--- 10459 Query 2397 AAACGGGAGGTCGCGCTGTACTCGCTGGCGAGCACGCCGATTGAGCGACATAGGAAGGTG 2456 ||| | | | | | |||||| ||||| || | |||| || ||||| || |||||| | Sbjct 10458 AAAGGTGTGATGGAGCTGTATTCGCTTTCGGGTACGCTCATCGAGCGCCACAGGAAGATC 10399 Query 2457 AGTGGGGAATACAACCCCTACGATCCAGCCATGGAAGCAATA-GGTGAAAAACTGCGAAC 2515 | ||||| || | ||||| ||||| || |||| || || || |||| || ||| Sbjct 10398 AAAGGGGACTATCATCCCTATGATCC-GCAATGGGAGGTGTACGGCGAAACCCTCCGACA 10340 Query 2516 GGAACGGATGTTGAAAAAGCTGAAGTACCGAA 2547 ||| || ||| |||||| | ||| ||||||| Sbjct 10339 GGAGCGCATGCTGAAAAGGATGAGCTACCGAA 10308 Score = 105 bits (116), Expect = 1e-18 Identities = 217/323 (67%), Gaps = 35/323 (11%) Strand=Plus/Minus Query 614 ATTGACGAGCCAAAGCTGCTGACAGGCTCGAACCAAAAGGTACGTGGTCGGTTATCTCCG 673 |||||| ||| || |||||| | || ||||||||||||| ||||| || |||||||| Sbjct 12251 ATTGACAGGCCTAATCTGCTGTTGGCCT-GAACCAAAAGGTATGTGGTTGGATATCTCCG 12193 Query 674 TAGGTCGTGGAGATACGTCGCCTTCAGACCACCGGTGAAAAGGCAGGTCCTAACCCAGTC 733 ||| ||| ||||||||| | ||| |||||||| | |||| ||| ||||| ||||| Sbjct 12192 TAGAAGTTGGGGATACGTCGTCGTCAAACCACCGGGGGAAAGTCAGACCCTAA-ACAGTC 12134 Query 734 GTGTG----ACA------------------GTCAGGGAACGTGGTAAGCCCGTATCGCCG 771 |||| || ||| ||||||||||||||||| ||| || Sbjct 12133 ATGTGCGGCGCAATTCGGCCGTGCGGGCATCTCAAGGAACGTGGTAAGCCCGACTCGTCG 12074 Query 772 C---------CCTCG-GGGCAGGGGAGCCGTAAGGCGAACTGTTGGCGGTGCGGGTATGG 821 | | ||| |||| | | |||| ||| ||| |||||| |||||||||| Sbjct 12073 CTTATCGGATCATCGAAGGCAAGTAACCCGTGAGGGAAACCCATGGCGGAGCGGGTATGG 12014 Query 822 GATCGCAGAGAAAGCGAACGCCAGGCTGTAATCGTCTGGATAGGGGTT-GGAACATCACC 880 || || |||| ||| | | ||||||||| | | |||||| || || | || Sbjct 12013 GAGGATGGAAAAAGTGAATGTCCGGCTGTAATGGCAGGAATAGGGATTCAAAATTTGTCC 11954 Query 881 CCACGGGAAACCGGGCAGACTTC 903 | ||| |||| || ||||||||| Sbjct 11953 CGACGTGAAAACGTGCAGACTTC 11931 >seq256 Length=183033 Score = 273 bits (302), Expect = 5e-69 Identities = 441/637 (69%), Gaps = 28/637 (4%) Strand=Plus/Plus Query 31613 ACTGACAGTTCGCGCATCGCCGCTGTTGCCAGAAAGCCCGACCGAGACTGATAGCGCTTA 31672 || || |||||||||| ||||| || ||||| || || || || || |||||| | Sbjct 59638 ACGGAAAGTTCGCGCAAAGCCGCCGTCGCCAGGAACCCAGAGCGCGAGGCATAGCGATGG 59697 Query 31673 TCCACCTTCACGCGCTCATCGATCCGCTGCAGAAGGTGTTCCGGGAGCGTCGCATTAAAG 31732 || | ||| ||||||||||| || | || ||| || || || || | || || || Sbjct 59698 TCTTTTTGCACTCGCTCATCGATACGATTCAAAAGTTGCTCAGGCAGTGAGGCGTTGAAC 59757 Query 31733 CGTACGGCCTTGCCCAGGTACGGGGTCACGTCGAAGTCAACCACCGCCCATACGCCACCT 31792 | || | |||||||||||| || || | || ||||| | ||||||||| |||||||| Sbjct 59758 CTGACTGACTTGCCCAGGTAAGGAGTGAGATCAAAGTCGATCACCGCCCACACGCCACCC 59817 Query 31793 TCGAAGTCCGGATTCTTCATATGGGCGTCAACGTCCTGCGGCTGGGGTAGCTCTTCGCCG 31852 | ||||||||||||| || |||| |||| || || | ||| || ||| || | Sbjct 59818 GCAAAGTCCGGATTCTCCAAATGGACGTCGACCTCTCTAGCCTGAGGAAGCCGCTCCTCA 59877 Query 31853 TCCGTAACCAAGCCTTCGAAGTGCAAGGCCAGCGCCTCTTCTACATTGGCCAGGGCCTCG 31912 || | |||||| || |||| ||||| || | || || ||||| |||| || ||| Sbjct 59878 TCAGCAACCAATCCCTCGAGGTGCAGCGCTAAAGCTTCGCGGACATTATCCAGAGCTTCG 59937 Query 31913 GACACCGTAGCGCCGGCAGAGAAGCAACCCGGCACATCGGGCACAGTCACGCCATAGTCA 31972 || | || | ||| ||||| |||||||| ||||| || || || ||||||| || || Sbjct 59938 GAAAAGGTTGTGCCCGCAGAAAAGCAACCTGGCACGTCCGGGACGGTCACGCTGTAATCT 59997 Query 31973 GAATCAGGGTCTTTGTGTAACACCACGGGGAATTTCATGGCT-CTACTCCG--TGAG--- 32026 ||||||| ||||||||||| |||||| || |||||||| | || || | |||| Sbjct 59998 GAATCAGCGTCTTTGTGTATCACCACTGGAAATTTCATTTTTCCTCCTTTGAATGAGCCG 60057 Query 32027 ----------ATTGACC------------GGCCTCACTTGAGGCCGGCTTGTTTCAGTAT 32064 ||| ||| | | |||||| ||||| ||| ||||| || Sbjct 60058 CAGCGGGATCATTCACCACATAACCTACGGTCATCACTTCAGGCCTGCTGATTTCAAAAT 60117 Query 32065 GTTGTTCAGGGTTCCTTTCGGTATCGTCGAGGACGGATGTTGAACCGTCACCTTTCCAGG 32124 | ||| || ||| || || | |||| || ||||| ||||||||||| || || Sbjct 60118 GCTGTGCAAGGTCCCCTTGGCTATCTCTGATTTAGGATGAGGAACCGTCACCCGGCCGGG 60177 Query 32125 CTTTGAAGGATGTTTGAACTGGTGGTGGCTACCTTTCACCGCCACTTCATACCAGCCATC 32184 ||| | | || ||||| || ||||| || |||||| ||||||| ||| |||| ||||| Sbjct 60178 CTTGGTTGAGTGCTTGAATTGATGGTGACTGCCTTTCGCCGCCACCTCAAACCATCCATC 60237 Query 32185 CTCCAACAGCAAATCAATCACTTCCCTACTCCGCATC 32221 | ||| |||||| ||||| || || || || | |||| Sbjct 60238 CGCCATCAGCAAGTCAATTACCTCTCTGCTTCTCATC 60274 Score = 147 bits (162), Expect = 5e-31 Identities = 105/121 (87%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 2850 CTGGGGGCCTATAGCTCAGTCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTT 2909 ||| |||||||||||||||| ||||||||||| ||||||||||||| |||||| |||| Sbjct 58804 CTGAGGGCCTATAGCTCAGTTGGTTAGAGCAGGGGACTCATAATCCCTTGGTCGTAGGTT 58863 Query 2910 CGAGTCCGTGTGGGCCCACCACCTTCAAAGCCGCGCACTGCGCGGCTTTCGCCTTTCTGG 2969 ||||||| ||||||||||| ||| ||||||||||| ||||||||||| | ||||||| Sbjct 58864 CGAGTCCTACTGGGCCCACCATCTTGAAAGCCGCGCATTGCGCGGCTTTGTCGTTTCTGG 58923 Query 2970 C 2970 | Sbjct 58924 C 58924 >seq245 Length=62233 Score = 228 bits (252), Expect = 2e-55 Identities = 785/1208 (65%), Gaps = 42/1208 (3%) Strand=Plus/Plus Query 1124 GTGGCACGACATCGACTGGTGTCGG-GTCCAGCGGAATGTCCGGGGAATGCAGGTACGGA 1182 |||| || |||||| ||| ||| || || || |||| | || |||| | || | Sbjct 31635 GTGGGACAGCATCGATTGGA-TCGCCGTACAACGTCGTGTCAGAGGGCTGCAAGCGCGTA 31693 Query 1183 TTGCGAAGGCTTGTCGGGAAGGCAAATGGCGCAGGGTGAAGGCCCTACAACGGATGCTGA 1242 ||| ||||||| | || |||| | || |||||| ||||| ||| || |||||| Sbjct 31694 TTGTGAAGGCTGTACAAGATGGCAGACATAACAAGGTGAAAGCCCTGCAATGGCTGCTGA 31753 Query 1243 CCCGCTCGA-CGTCGGCCAGGTACCTGGCTGT---ACGGAGAGTCACTGAAAACCAGGGC 1298 | | |||| | ||| ||| | || |||| |||| || |||||||| | ||| Sbjct 31754 CTCACTCGTTCAGTGGCAAGGCATTTG-CTGTGAAACGG---GTGTCTGAAAACAAAGGC 31809 Query 1299 AAGCGCACGGCGGGAGTCGACCGCGTGCTCTGGGATACGCCTGACACCAAGTGGAAAGCG 1358 || || | || || ||| || ||| |||||||| ||||| ||| Sbjct 31810 AAAAATACCCCCGGCGTGGACAAGGTTACTTGGAATACGCCTAGGGCCAAGCTCGGCGCG 31869 Query 1359 GCACAAGGGTTGAAAAGGCGCGGGTACCAACCTCGGCCTCTACGGCGAGTGTTCATCCCG 1418 | | ||||| |||| || ||| || | || || ||| ||||| | || ||| Sbjct 31870 ATAGAGTCGTTGACGCGGCGAGGTTACTCGCCGCTCCCGCTTCGGAGAGTGCTTATTCCG 31929 Query 1419 AAGTCGAACGGAAAGGAGCGCCCCCTGGGTATCCCGACCATGACTGACAGGGCAATGCAG 1478 ||| ||||| || | | || || || || || | |||| | |||| |||||| Sbjct 31930 AAGAAAAACGGCAAAACGAGACCTCTTGGAATTCCCGCGATGAAATGCCGGGCCATGCAG 31989 Query 1479 GCACTCTACCTGCTCGCTCTGTCGCCCATTGCAGAAACCACCGGCGATCCGAACAGCTAT 1538 || || | ||||| |||||| || || || ||||| |||||||| |||||| ||| Sbjct 31990 GCGCTTCATCTGCTGGCTCTGGAACCGATAGCGGAAACTACCGGCGACCCGAACTCTTAT 32049 Query 1539 GGCTTCAGGATCGAGCGATCCACGGCGGATGCAATGTCCCAGTTGTTCGTTTGCCTATCC 1598 || |||||| || || || || |||||||| | | |||| || | | || || Sbjct 32050 GGGTTCAGGCCGGAACGCTCAACTGCGGATGCCGTCGCACAGTGCTTTGGTGTGCTGTCA 32109 Query 1599 GGAAAGGCTTCGGCCCAATGGATACTGGAGGCGGACATACAAGGGTGTTTTGACCACATC 1658 |||| || || ||||| | | |||| ||||| ||||| ||||| ||| | ||| Sbjct 32110 CGAAAAGCAAACGCGGAATGGGTGTTAGAGGGCGACATTCAAGGCTGTTTCGACAATATC 32169 Query 1659 AATCATGACTGGCTACTGAACCATGTCCCCACGGACAAGGTGATCCTCCGGAAATGGTTG 1718 | ||||||||| | | | | | |||| |||||||| ||| | | ||||||| | Sbjct 32170 AGCCATGACTGGTTGATCGCCAACATTCCCATGGACAAGGCGATTTTGCAGAAATGGCTC 32229 Query 1719 AAGGCCGGCGTGATCCACAAAGGCCAGCT----CCAGGCAACGGATGCTGGAACACCTCA 1774 ||| || || || || ||||| || || ||| | ||||| || || Sbjct 32230 CGGGCTGGTTATGTCTACCAAAAGCAGCTATTCCCCAGCCACG----CCGGAACCCCGCA 32285 Query 1775 AGGCGGAATCATCTCGCCTACTTTGGCAAACATGGTGCTCGATGGCCTGGAATCACAGCT 1834 || || ||||| || || ||||| |||||| ||| ||||| ||||| | ||| Sbjct 32286 GGGAGGCATCATATCCCCGGGGTTGGCGAACATGACGCTGGATGGGTTGGAAGCGATGCT 32345 Query 1835 C---AAGCGA-----CACCTGGGCGTGACAAGGGCGAAGAAGCTGAAACTCAATGTGGTG 1886 ||| || || | | ||| || |||| || || | | |||||| Sbjct 32346 GGCGAAGAGATTTCCCAACGCGAAGTGGACAGCCCGAAAAA--TG---CGC---GTGGTG 32397 Query 1887 CGCTATGCGGACGACTTCGTCATCACCGGTGTCTCTCCCGAGGTACTGGAGAAAGAAGTC 1946 || ||||| || || ||| ||||||| ||| || || |||||||| |||||| Sbjct 32398 CGTTATGCAGATGATTTCATCATCACTGGTTGTTCGAAAGAATGGCTGGAGAATGAAGTC 32457 Query 1947 AAACCCTGGGTAGAGCAGTTCCTGGCGGTACGCGGGCTGCAGCTCTCTCTGGAGAAAACG 2006 | ||| || | | || ||||| | || || || ||||||| ||| ||||| Sbjct 32458 AGGCCCGCCGTGGTTGAATTTCTGGCAGAGCGTGGACTTGTCCTCTCTCCGGAAAAAACC 32517 Query 2007 CGGATCGCCCACATAGATCAGGGCTTCGACTTCCTCGGTTGGAACTTCCGCAAGTACAAC 2066 ||| | ||||||| | || |||||||||||||| |||||| | |||||||||||| Sbjct 32518 AAGATAACGCACATAGGGGACGGGTTCGACTTCCTCGGATGGAACCTGCGCAAGTACAAC 32577 Query 2067 GGGAAGCTTCTGATCAAACCCAGCCAGAAGAAC-GCGAAAGCGTTCTAC--GGCAAGGTG 2123 || ||||| |||||||| || | || |||| || | | ||||| | |||| || Sbjct 32578 GGCAAGCTCCTGATCAAGCCGTCCAAGGCGAACATCG---GGGCTCTACTTGCCAAGCTG 32634 Query 2124 AAGGAGGTCATCGAAACCAGCAGGACGGCAAGGCAAGAGGACTTGATCCGAACGCTGAAT 2183 ||| | ||| | |||| || ||| | | || | ||||||| | ||| || Sbjct 32635 CGAGAGTTGATCAAGACCAACAAAACGATACGACAGGCTAACTTGATAGGTTTGCTCAAC 32694 Query 2184 CCGATTCTGCGCGGCTGGGCGCTGTATCACCAGCCA-GTGGTTGCCAAGCAAACGTTCAG 2242 ||| |||| || ||||||||| ||||| ||| || || || |||||| | |||| Sbjct 32695 CCGGTTCTACGGGGCTGGGCGAACTATCA-CAGTCATGTCGTCGCCAAGAAGGTCTTCAA 32753 Query 2243 CCGCATGGACAACAGAGTGTTTCTCAAGCTCTGGCGTTGGGCGAAACGGCGGCACCCGAA 2302 || |||||| | ||||| | ||||||||| |||||| ||| || ||||| Sbjct 32754 CCAGGTGGACAGCGCAGTGTGGGAAATGCTCTGGCGATGGGCGGTACGTCGCCACCCTCG 32813 Query 2303 CAAGTCAC 2310 |||| ||| Sbjct 32814 CAAGACAC 32821 Score = 100 bits (110), Expect = 6e-17 Identities = 138/191 (72%), Gaps = 9/191 (5%) Strand=Plus/Plus Query 740 CAGTCAG-GGAACGTGGTAAGCCCGTATCGCCGCCCTCGGGGCAGGGGAGCCGTAAGGCG 798 |||| || ||||||||| || |||||||||| || || ||| | |||||| | Sbjct 31372 CAGTAAGCGGAACGTGGAAATCCCGTATCGCTCCCGTCAGGGAA----AGCCGTTTGTAA 31427 Query 799 AACTGT----TGGCGGTGCGGGTATGGGATCGCAGAGAAAGCGAACGCCAGGCTGTAATC 854 || | |||||||||||| ||| || || |||||||||||| ||||||| Sbjct 31428 AAATTGCCCATGGCGGTGCGGGCGAAGGAACGAGGAAAAAGCGAACGCCGTCCTGTAATG 31487 Query 855 GTCTGGATAGGGGTTGGAACATCACCCCACGGGAAACCGGGCAGACTTCTGCGTGGTCTT 914 | ||||||| ||||| |||||||| |||| |||| ||||||||| || | |||||| Sbjct 31488 GGTTGGATAGAGGTTGAAACATCACTTCACGCGAAAGCGGGCAGACGTCCTCATGGTCTC 31547 Query 915 TCGTCGCAAGA 925 || || || || Sbjct 31548 TCTTCACACGA 31558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104299451138190