Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_031080.1 Length=160985 Score E Sequences producing significant alignments: (Bits) Value seq2405 91.5 2e-13 seq581 82.4 8e-11 >seq2405 Length=2039 Score = 91.5 bits (100), Expect = 2e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 120466 CGGGCCGGGCCGTGGATCCGCCGGAGGCTCGCTGGTCACCTACGTCATGGGCATCACCTC 120525 |||||| ||||||||||| || | || ||| |||| |||||| ||||| |||||| Sbjct 909 CGGGCCCGGCCGTGGATCGGCTGCCGGTTCGTTGGTGGCCTACGCGATGGGTATCACCAA 850 Query 120526 GATCGATCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGATCGCCCCGA 120585 ||||| || ||| ||||| || |||||||||| ||| ||||||| || || Sbjct 849 CATCGACCCCATCCCGTACGGGTTGCTGTTCGAGCGATTCCTCAACCCCGAGCGTGTGTC 790 Query 120586 CTTTCCCGACATCGACGTCGACTTC 120610 | | ||||| ||||| |||||||| Sbjct 789 CATGCCCGATATCGATATCGACTTC 765 >seq581 Length=167191 Score = 82.4 bits (90), Expect = 8e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 100839 TCGATGCGAAGGTAGCTCAGCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGAT 100898 || ||||||| ||||||||| ||||||||| | ||||||||||||| | ||||||| | | Sbjct 15102 TCAATGCGAAAGTAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTT 15043 Query 100899 CGTAACCCGTTCTTCGCTCT 100918 || | | ||| |||||||| Sbjct 15042 CGAATCTCGTCTTTCGCTCT 15023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514933838611000