Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_031098.1 Length=40749 Score E Sequences producing significant alignments: (Bits) Value seq909 93.3 1e-14 >seq909 Length=21192 Score = 93.3 bits (102), Expect = 1e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 33276 GGGTTGAAAGCAATCGCTAAAGAATTTGATTGCGTTGTATTCGCTCTATCTCAGCTTAGC 33335 || ||||||| | || |||||| | | ||| || |||| || || ||||| | | Sbjct 7739 GGCTTGAAAGGCCTGGCAAAAGAACTCGGCTGCCCCGTGATCGCGCTGTCCCAGCTGAAC 7798 Query 33336 CGCAACTTAGAGAACAGACCTAACAAACGTCCAGTTAATGCTGATCTCCGCGAATCTGGC 33395 ||| | || | | || || |||||||| || | | || | |||||||| ||| Sbjct 7799 CGCTCGCTGGAACAACGCCCGAATAAACGTCCCGTGATGTCCGACTTGCGCGAATCGGGC 7858 Query 33396 CAATTGGAGCAGGATGCGGACGTGATTCTATTCATTTACCGCGACGAAGTTTACGACAAG 33455 | ||||||||||| |||||||| || ||||||||||||||||| || || || Sbjct 7859 GCTATCGAGCAGGATGCCGACGTGATCCTGTTCATTTACCGCGACGAGGTGTATAACCCC 7918 Query 33456 AACTCAAAAGATGCAGGAACTGCTGAAATCATCATCGGAAA 33496 |||| ||| ||||| || |||||||||||||| || Sbjct 7919 GACTCGCCAGACAAGGGAACGGCCGAAATCATCATCGGTAA 7959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130253534012910