Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_001317.1 Length=30624 Score E Sequences producing significant alignments: (Bits) Value seq1445 147 4e-31 >seq1445 Length=14432 Score = 147 bits (162), Expect = 4e-31 Identities = 369/556 (66%), Gaps = 6/556 (1%) Strand=Plus/Plus Query 219 ACTCTTTGAACCTGATGACCTCCATGCCGAGCCAGTCGTTTACCTCCCTGAACCTGTCCT 278 |||| |||||||||| ||||| || ||||| ||||| |||| | ||| ||| Sbjct 11786 ACTCCTTGAACCTGACAACCTCTTCACCCAGCCACTCGTTGACCTGGGCCAGCCTCGCCT 11845 Query 279 GCAGCGGCGACAGGTCGTTA--CGCACAAATACCTTTGCCACTTTCT-CAACGTCACCGA 335 ||| |||| ||| ||||| ||| |||| ||| || | | | ||||| | | | Sbjct 11846 GCAACGGCTCCAGCTCGTTGACCGCCCAAA--CCTCAGCAGCCTCCCGCAACGACCCAAA 11903 Query 336 GCGAGCCGATATTCTCGGGCTTGCCGCCCATGAGCTGGAACGGTACGCGGTGCGCGTCCA 395 | ||| |||| ||| | |||||| | ||| || | ||| ||| | | Sbjct 11904 ACCGCCCGCG-TTCTGCGGCACGATGCCCATCAACTGCGGTGGAATGCGCAACGCCGCGA 11962 Query 396 TCAGGTCGGCGGCGCTGGCTTTCTTGATGTTGAAAAAGTCATCCTTTGTGGCGACCTCGC 455 ||| ||| | |||| || ||||| | || || ||||| | || ||||||| Sbjct 11963 GCAGATCGTCACGGCTGATGTTTTTGATCGAGCTGAATTCGTCCTTGGCCGCAACCTCGC 12022 Query 456 TCAGTGGCACGATTTTAATGCCGTCCGGTTTTCCATTGGGAGCGTAGAAAAACAGGTTTT 515 ||| || | || | ||||||||| || || || ||||| | ||||||||| Sbjct 12023 TCACCGGGATGAGCTGAATGCCGTCTTTCTTGCCTGCCGGCGCGTACACAAACAGGTTGC 12082 Query 516 TAAAATTGCCGAGCCCTTTCGAGTTGCGCATCGCCTCGCGCAGCGATTCGACGTCGGTCG 575 ||| ||||| ||||||||||||| || || |||||| || |||| ||| Sbjct 12083 GAAAGTTGCCTGGCCCTTTCGAGTTCTTCAGTGCGGTGCGCAGTGAGTCGATGTCCTCTT 12142 Query 576 CGCTCTGCGCCGGGTCGGTCACATACATGATGTAACCCGCATGCGCGCCGTTCTGGTAAT 635 | ||||||||| |||||||| |||| ||| |||| ||||| |||||| | ||| | Sbjct 12143 CCTTCTGCGCCGCGTCGGTCATGTACAGAATGAAACCGGCATGGCTGCCGTTGTTGTAGT 12202 Query 636 ACTTGCGGCGGAACAGCGTTGCGGATTCATTCAGCCAGGCGGAATTAAGCGCGCTGAGAT 695 ||||||| ||||||||||| ||| || || ||| ||| | ||||| || Sbjct 12203 ACTTGCGCCGGAACAGCGTGGCGCTCTCGTTGAGCAGTGCGCTTTGCAGCGCTGCCAGCC 12262 Query 696 ATTCGGGCAGGCCGTAAATCTCCTGATTAATGTCGGGCTCCAGCAGGTGAAACACGGTAT 755 | || ||||||||||| || ||||| || || |||| ||| ||| ||| | | | | Sbjct 12263 ACTCCGGCAGGCCGTAGATTTCCTGGTTGATATCGGCCTCGCGCAAGTGGCAGATCGAAC 12322 Query 756 CAGGCGCGAATTCATG 771 | || || |||||||| Sbjct 12323 CGGGGGCAAATTCATG 12338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97866164528568