Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 1e-12 >seq2 Length=124989 Score = 87.8 bits (96), Expect = 1e-12 Identities = 174/254 (69%), Gaps = 8/254 (3%) Strand=Plus/Plus Query 101687 TCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCC-AGGCAC 101745 || ||||| | | ||| | ||| | ||| |||| ||||| ||||| || || | || | Sbjct 92906 TCGATGTGGTTCATATAAAGGTGCGTATCGCCTAGGGTATGAATAAATTCACCCACGC-C 92964 Query 101746 TAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGG 101805 ||| | | || || || | ||||||||| | | | || ||| |||||||| || Sbjct 92965 TAGCTGACAAACCTGCGCCACCATGCAAGTAAGTAAGGCGTAAGAAGCGATGTTAAAAGG 93024 Query 101806 CACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACA 101865 |||||| || | ||| || | |||||| ||||| || |||||||| || Sbjct 93025 CACTCCCAAAAATACATCGGCGCTGCGTTGATAAAGTTGGCAAGAAAGCTTGTGATTGGC 93084 Query 101866 GACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGG---AATGTCTGA 101922 |||||||||||| | |||||| ||||| || | | |||||| || |||| || Sbjct 93085 TACATAAAATTGAAAAAGTACATGGCAAGGAGGAAGCGCCATTTGTGGTATAATGCCT-- 93142 Query 101923 AACATTCCAAGCAC 101936 ||||||||||||| Sbjct 93143 -ACATTCCAAGCAC 93155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361216973029274