Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_001609.1 Length=11624 Score E Sequences producing significant alignments: (Bits) Value seq1603 2450 0.0 seq2982 120 2e-23 seq955 113 3e-21 >seq1603 Length=11327 Score = 2450 bits (2716), Expect = 0.0 Identities = 2164/2701 (80%), Gaps = 4/2701 (0%) Strand=Plus/Plus Query 4604 aaaaaaaGACCGGCAGATGCCGGTCAGGTGGGTCAGGCTGTTGTAGGGTCGTCACATTTT 4663 |||||||||||||| |||||||||||| | | | ||||| |||||||| Sbjct 1410 AAAAAAAGACCGGCGATTGCCGGTCAGGTTATTTCGCTAGG----GGGTCATCACATTTC 1465 Query 4664 GGCAGCCAGTCGCCGTAGCTTTCCTCTTTCAGCGTCAGGTTGGTCTGTATCCCCTGTTTG 4723 |||||||||||| ||| |||||||||| | | || || ||||| ||||| ||||| || Sbjct 1466 GGCAGCCAGTCGGCGTTGCTTTCCTCTCTTAACGCGAGATTGGTTTGTATGCCCTGATTT 1525 Query 4724 GTATGGCGTTTCTCGTAATTCAGTCCGTATTCCTTCAGCATCACCGGCAGCCCCAGCCCG 4783 | |||| ||||| ||| | || ||||| || |||||||| | |||| |||| || Sbjct 1526 TTTCGGCGCTTCTCATAACTTAGCCCGTACTCTTTCAGCATGGCTGGCATCCCCTTACCA 1585 Query 4784 AACATTTTCAGACTGAGTACATTCCGGTAGCCGTTTGCCTCCATGTAGGCCAGATAGGCG 4843 ||||| | || ||||| ||||| |||||||| || ||||| || ||||||||||| Sbjct 1586 AACATGGTGAGGCTGAGAGTATTCCTGTAGCCGTGGGCTTCCATATACGCCAGATAGGCA 1645 Query 4844 TGATAGAGGTATTTACGGTAATTGCGCGGGATGATACTGGCGTTCCCCATATACATGCCG 4903 ||||| || || || | ||||| ||||| |||| || || |||||||| || Sbjct 1646 TGATACAGATACAGGCGCGGCTGACGCGGAATGATGTTGGCATTGCCAATATACATACCC 1705 Query 4904 CTGGTCTGCGGCAGGGTTTCCAGATAGCCGATAAAATCAAACGTCGGGTCGGCATCCCGT 4963 | || |||||| | ||||||||||| ||||||||| |||||||| || || || Sbjct 1706 TCAGGCTCCGGCAGTGCCTCCAGATAGCCACAAAAATCAAAGGTCGGGTCAGCGTCGCGC 1765 Query 4964 TTGATGTTCAGTGCCTCGTCTGAGTTCTGCTGGGACTGAAGCAGTGACCGGGCGAGCATC 5023 ||||| | ||||||||||| ||||||||||| ||||| ||||| | || || |||| Sbjct 1766 TTGATACTTAGTGCCTCGTCGGAGTTCTGCTGTGACTGGAGCAGGGCACGCGCTGTCATC 1825 Query 5024 GGGTCGCTGAACTTCTGCATCAGGTGACGCACGATGACCGCCAGCTCGCGGGTGATTTTG 5083 |||||||||||||||||||| || || ||||| || || |||||||| |||| ||||||| Sbjct 1826 GGGTCGCTGAACTTCTGCATTAGCTGGCGCACAATCACGGCCAGCTCACGGGCGATTTTG 1885 Query 5084 TCCTTAAGCTGCGGGTCGCGCTCCTGCGGGGCTATCTGTTCCGGGAAGTGAATAATCACC 5143 | ||| |||||||||||||| || | |||||| |||||||||||||| || | ||||||| Sbjct 1886 TTCTTGAGCTGCGGGTCGCGTTCATCCGGGGCAATCTGTTCCGGGAAATGCAGAATCACC 1945 Query 5144 CGTCGGCGTGACACGCCGCCGCTGCGGTCGGTGAAGCGCATCGGGTTATTGTTCACGGCC 5203 || || || || || ||||||||||||||||| || ||||||||||| |||||||||||| Sbjct 1946 CGGCGACGGGAAACACCGCCGCTGCGGTCGGTAAATCGCATCGGGTTGTTGTTCACGGCC 2005 Query 5204 AGAATCACCGCCGGGATGTGCGTGGAGTACGCATCCCGGTATTTCGGGTCAACGGACACC 5263 ||||||||||||||||| || |||||||| |||||| |||||||||||| || || ||| Sbjct 2006 AGAATCACCGCCGGGATATGGGTGGAGTAAGCATCCTTGTATTTCGGGTCGACCGAGACC 2065 Query 5264 GCATCGCCGCCGGTGATGGCCTTGAGTCCGGCACCGTCGCCGCTCCATTTTTCCTGGTCC 5323 ||||| ||||||||||||||||||||||| || ||||| ||||||||||| |||||||| Sbjct 2066 GCATCACCGCCGGTGATGGCCTTGAGTCCTGCCCCGTCACCGCTCCATTTCTCCTGGTCA 2125 Query 5324 GGCAGGCGTATCAGTGAGAAGCCAGTTAACGCGGCACGTTCACGCGGGGATTCCAGCGTC 5383 ||||| || || || ||||||||| | ||||| |||||||||||||| || |||||||| Sbjct 2126 GGCAGACGGATGAGCGAGAAGCCAATCAACGCAGCACGTTCACGCGGCGACTCCAGCGTT 2185 Query 5384 TCGATGGTGGCCGACGTGGCGTTATCCTCCCCGGCCAGCAGGGTGGCTATTTCGGCCATG 5443 |||||||| ||||||||||||||||| |||||||| |||| ||| || |||||||||| Sbjct 2186 TCGATGGTAGCCGACGTGGCGTTATCTTCCCCGGCAAGCATGGTCGCAATTTCGGCCAGA 2245 Query 5444 ATACTTTTGCCGCTGCCGCCGGGACCGGTCACCTCCAGAAAGAGCTGCCAGTCGTAGCGG 5503 |||||||| |||||||| || || |||||||| || |||||||||||||||||||| ||| Sbjct 2246 ATACTTTTACCGCTGCCACCCGGCCCGGTCACTTCGAGAAAGAGCTGCCAGTCGTAACGG 2305 Query 5504 TTTGCCAGCACCATAAACAGTGCAGCCAGAATCACGTCGCGTTTTTCCGCACGGCCACCG 5563 || ||||||||||||||||| || ||||||||||||||||||||||||| | ||||||| Sbjct 2306 TTCGCCAGCACCATAAACAGCGCGGCCAGAATCACGTCGCGTTTTTCCGGTCTGCCACCG 2365 Query 5564 GCGGCACGGTCAAGCCAGCGCCAGAAGGCGGGGGCGTGGGTTTCCAGCGTTTCACCGTCC 5623 ||||| ||||| |||||||||||||| | || ||||| |||||||||||||| || ||| Sbjct 2366 GCGGCGCGGTCGAGCCAGCGCCAGAAATCCGGCGCGTGAGTTTCCAGCGTTTCGCCCTCC 2425 Query 5624 ACCGGCGGGGTGAAATCCACATCGCACAGGGTGCGCATCCAGTGTGACGGACTGTGCGGG 5683 ||||||||||| ||||| |||||||| || ||||||| |||||| || ||||||| Sbjct 2426 ACCGGCGGGGTAAAATCGACATCGCAAAGCGTGCGCAGCCAGTGCGATTTGTGGTGCGGG 2485 Query 5684 TGGAACGTGCCGTTCTGCGTGTCGAGCACGCCGTTACGAAAGCCAATCAGGCGGCGGGAG 5743 ||| |||||| | || || || |||||||||||||| |||||||| ||||| | Sbjct 2486 CTGAATGTGCCGGTGGCGGTATCAAGTACGCCGTTACGAAAACCAATCAGACGGCGCGCT 2545 Query 5744 GGGGCTTCCTGCTGCGGAATAATCAGCTTCAGGGTATCCACCACGGAGGCCACCTTCCCG 5803 || || |||||||||||||||||||| ||||| || |||||||| ||||| | ||||| Sbjct 2546 GGTGCGTCCTGCTGCGGAATAATCAGTTTCAGAGTCTCCACCACTGAGGCAATTTTCCCC 2605 Query 5804 GAGGAGAACGGCGCACGCAGACGCTGAAACAGCCCGGCCACATCCCGGGCAAAGTCCTGT 5863 || ||||| || ||||||||||||||||| | ||||||||| || ||||||||||| Sbjct 2606 GACGAGAATGGGGCACGCAGACGCTGAAATAACCCGGCCACGTCGCGGGCAAAGTCTGAC 2665 Query 5864 GGCGGCAGCACCTTCCAGACACCATTTTCATAGCGGGACAGAAGCTGGCCGTTGGCATCG 5923 || || | | ||||| | || |||||||||||||| ||||||||||| ||||| Sbjct 2666 GGTGGAATGATTTTCCATATCCCGGCCTCATAGCGGGACAGGAGCTGGCCGTTCGCATCC 2725 Query 5924 ACCGCGAGCGCCTCGCCGTAATGCTCATAGATACGCATGGCCTTTTCGCTGGTACTCATG 5983 || || ||||| |||||||||||||||| | ||||| |||||||| ||||| |||||| Sbjct 2726 ACGGCCAGCGCTTCGCCGTAATGCTCATGCACCCGCATTGCCTTTTCACTGGTGCTCATG 2785 Query 5984 GCGGAAAACTCCGCTTCGCTCATGGTGTCGAACGGGCTTTCAGCCGGTGGCCGGATGGCA 6043 |||| ||| ||||| ||||||||||| ||| ||||| |||||||||||||||||||| Sbjct 2786 GCGGTAAATTCCGCCTCGCTCATGGTAGTGAAAGGGCTGTCAGCCGGTGGCCGGATGGCG 2845 Query 6044 TCGTAAATGGCCTTACGGGTGGCCTCCCCGCCGTACTGCGTGAAGGCATCATTCCAGTCA 6103 || |||||||| || || | |||||| | || | ||| || || |||||||||||| Sbjct 2846 TCATAAATGGCTTTCCGCATCGCCTCCTCACCTTTCTGTTCAAATGCGTCATTCCAGTCA 2905 Query 6104 CCGAAGACCGGCGGCAGGGCAACAACACCTTCACACGCATCTGCGGCTGCGGCGGCTTTT 6163 ||||| ||||||||||||||||||| ||| ||||| || |||||||| || |||||||| Sbjct 2906 CCGAACACCGGCGGCAGGGCAACAATACCGTCACAGGCTTCTGCGGCCGCTGCGGCTTTG 2965 Query 6164 TTCTGGCCGTCACCACTGAGGTCACGGTCAGCGGCAAGGACAATCTGACAGGCGGGGTGC 6223 |||||||||| || | ||||| ||||| ||||| ||||||||||||||||| |||| Sbjct 2966 GTCTGGCCGTCGCCGTTAAGGTCGCGGTCGGCGGCGAGGACAATCTGACAGGCCGGGTAT 3025 Query 6224 TTCTGCCGGGCAAGGCTGGCCAGAGAAAGGAGGTTCACGGAAGAAAGCGCCACCATCACC 6283 ||||| ||||||||||| ||||||||||||||||| |||| || || |||||||| || Sbjct 3026 TTCTGACGGGCAAGGCTCGCCAGAGAAAGGAGGTTTGCGGACGACAGTGCCACCATGACG 3085 Query 6284 GTTTCACCGGTCAGGTGATGTACGGTAAGTGCGGTCGCGTATCCCTCCGCTATCCACAGA 6343 ||||| |||||||||||||||||||| || |||||||| || ||||||||||||||||| Sbjct 3086 GTTTCCCCGGTCAGGTGATGTACGGTGAGCGCGGTCGCATAGCCCTCCGCTATCCACAGC 3145 Query 6344 CGTTTTCCGGCCTGATTCTGTCCTTCAAGGGTGTGACAGGTGCCCCTGACCTGTCCGCCT 6403 |||||||| ||||| || | ||||| | |||||| | | || | ||| |||||| Sbjct 3146 CGTTTTCCCGCCTGTTTTTTCCCTTCGATGGTGTGGCTCGCTCCTTTTACCGCCCCGCCT 3205 Query 6404 TTCAGGGTGCGCTTACGGCCGTCAGCACTGATTAACTGAAGGTTAACCAGTTCGCCGCTG 6463 ||||||||||| || | || |||| | |||| | |||||||||||||||| | || | Sbjct 3206 TTCAGGGTGCGTTTGAGACCCTCAGAATTGATGAGCTGAAGGTTAACCAGTGCATCGGTA 3265 Query 6464 TCGTCATACAGTGGCACCACAAGGTCACCGGCGCGCCAGCTCACGCCACCGGCTCTGTGT 6523 | ||||||||| || || || | ||||||||||| | ||||||| |||| | | || Sbjct 3266 TTGTCATACAGCGGGACAACCACATCACCGGCGCGGAACGTCACGCCGCCGGTTTTATGC 3325 Query 6524 GTGCCGGTCAGCATCCGGCATTCCCGGCCGGGAAAGCCCTTGCGGGTCAGGTAGGCGTTA 6583 | | || ||| || | |||||| | |||| |||||||||||||||||||||||||| Sbjct 3326 ACGGCCGTGAGCGTCAGACATTCCAGAGCGGGGAAGCCCTTGCGGGTCAGGTAGGCGTTG 3385 Query 6584 CCGGTTCCGGTACGGGTTTTCGCCATCAGGGTTTGTGCCAGTGCGGCGGCGTTCTTCCGG 6643 ||| | | || ||||||||| ||||||| | ||||| ||||| || || ||| Sbjct 3386 CCGCTGGCCGTGCGGGTTTTCTCCATCAGTCTGACGGCCAGCGCGGCCGCCGCTTTACGG 3445 Query 6644 GCAGCGTCTGTTTCATCAACGGCGGCGGTCGTCACTGCCGGGTCAGCCGGTGGCAGGCTG 6703 | || || |||||| | | ||||| |||| ||||| || |||| | |||| | Sbjct 3446 TCTGCTTCGGTTTCAGCCTCTGCGGCCACAATCACCTCCGGGGCAACCGGCGACAGGTTA 3505 Query 6704 CCGGTCACGGCAGCCACCTTTGCGGCCGCGTCGGACGGGGAAACACCAAAAACCTTTTCA 6763 |||| ||| || ||||||| ||| || || ||||| ||| || || ||||||||| Sbjct 3506 CCGGCGACGACATTCACCTTTTGGGCTGCCTCTGACGGATTAACGCCGAACACCTTTTCA 3565 Query 6764 ACCAGTTTCAGGCCGTCACCGGCACCACACTGATTGCAGTACCAGGTGCCGCGCCCCTCC 6823 |||||||||||||| || || || || ||||| || ||| |||| || ||||||||||| Sbjct 3566 ACCAGTTTCAGGCCATCCCCTGCGCCGCACTGGTTACAGAACCACGTCCCGCGCCCCTCT 3625 Query 6824 CTGTCATCAAAACGGAAGCGGTCACTCCCGCCACAGACCGGACAGGGCTGATGACGGTTC 6883 | || ||||| ||||| |||||| ||||| || ||||| |||| |||||| ||||| Sbjct 3626 TTATCGTCAAAGCGGAAACGGTCAGAACCGCCGCACACCGGGCAGGCCTGATGCCGGTTT 3685 Query 6884 TTCAGCACCTGAATCCCCAGCGCCGGGAGAATACGCGGCCAGTGGCCGAGCGCATGGCTG 6943 || | ||||| | ||||||||||| |||||||||| |||||||||| ||||| | Sbjct 3686 TTAATCACCTTCACACCCAGCGCCGGCAGAATACGCGACCAGTGGCCGCAGGCATGTTTT 3745 Query 6944 ACGGTGGCGGTTACGTTCATTTTCATGGTGTTGTTCTCCTTCAGTGCAGTACCGGCGCTT 7003 || || | |||||||||||||||||||| | |||||| ||||||||||||||| || Sbjct 3746 ACCGTTTCCGTTACGTTCATTTTCATGGTTATTTTCTCCCTCAGTGCAGTACCGGTGCGG 3805 Query 7004 TTATGTGACGGGCACAGAGTTCATCCATCACAACCAGCCCGAGAAAGGACAGCGACGGCG 7063 | || |||||| | || || ||||||||||| ||||||||||||||||||| ||||||| Sbjct 3806 TGATATGACGGACGCAAAGCTCATCCATCACGGCCAGCCCGAGAAAGGACAGTGACGGCG 3865 Query 7064 CGGCCTTCAGGGGGCCGGATTCCATTAAATCTTCCAGCAGGGCACAGGCTATCTGACGCC 7123 |||| || || || |||| ||||||||||||||||||||| |||||||| ||||| || | Sbjct 3866 CGGCTTTGAGTGGTCCGGCTTCCATTAAATCTTCCAGCAGTGCACAGGCAATCTGGCGGC 3925 Query 7124 CTTTTTCCTCACCGTGCTGGCGCAGATAAAAGCCTTCCAGCTCAGCGGCGATGGCCGCCT 7183 |||||||||| |||||||||||||| || || || |||||||| ||||| || || | Sbjct 3926 CTTTTTCCTCGCCGTGCTGGCGCAGGTAGAATCCCTCCAGCTCGGCGGCAATAGCGCTTT 3985 Query 7184 CCAGTGACTCAAGGGTGAGATGCGGGTAGCGGTGCTGACGTTCGCACACGGTCAGCCAGG 7243 |||||| || |||||||| |||||||||||||||||||||||||||| ||||||||| | Sbjct 3986 CCAGTGTGTCGAGGGTGAGTTGCGGGTAGCGGTGCTGACGTTCGCACAGGGTCAGCCATG 4045 Query 7244 CACAGGCGACAGCGCGACGGTAAAGGGCAGCGCGTAAGACGGGCGGTAAGGGTGTTTTCA 7303 ||||||| || |||||||| || || || |||||||| ||||||||||| || |||||| Sbjct 4046 CACAGGCCACGGCGCGACGATACAGCGCGGCGCGTAATACGGGCGGTAATGGCTTTTTCA 4105 Query 7304 T 7304 | Sbjct 4106 T 4106 Score = 526 bits (582), Expect = 2e-145 Identities = 679/937 (72%), Gaps = 58/937 (6%) Strand=Plus/Plus Query 8180 CACCTCCACCACCGGCAGACGGGCAGCAAGGGAGAGCACATAGTCACGGACAAGGGAACG 8239 ||||||| | |||||||||||| |||||| ||||| || || ||||| || |||||| | Sbjct 4336 CACCTCCGCAACCGGCAGACGGCCAGCAAACGAGAGGACGTAATCACGAACGAGGGAAAG 4395 Query 8240 GCGGGCACTGCGTTCATCACCGGCGACGGTGCGAAGCATACAGATACGGGGATGACGGTC 8299 || || || | ||||||||||| |||||||| ||||||||||||||||| | |||||| Sbjct 4396 ACGTGCGGTGTGCTCATCACCGGCAACGGTGCGTAGCATACAGATACGGGGTTTACGGTC 4455 Query 8300 TGCGCGACGGACAGCCGCAAACACAAAGACAAATTCAGGGTGTGAGGGGGTAAGGGTTGT 8359 ||||||||| || || ||||||||||||||||| | |||||||| ||||| ||||| || Sbjct 4456 TGCGCGACGAACGGCGGCAAACACAAAGACAAACTGCGGGTGTGACGGGGTGAGGGTCGT 4515 Query 8360 AGCCATGATGGCAGCCTCCTGTGAA-TAGCAAATAACGCTATCGCCGGAGTTCTCACGCT 8418 |||||| |||| |||||| |||| |||| || || | | ||||||||| ||||| Sbjct 4516 AGCCATAGGGGCAACCTCCT-TGAAGTAGCGGTTATTGCCACCACCGGAGTTCCTACGCT 4574 Query 8419 CGATGGCGATAGCCCAGACGGGGGTGAGAATACCGG-CTTCACAGGATACCGGCCAGCCC 8477 | || | | ||| |||||||| ||||||||| ||||| |||| |||||||||||| Sbjct 4575 CATGGGTGGTGACCCGAACGGGGGTAGGAATACCGGCCTTCA-AGGAAACCGGCCAGCCC 4633 Query 8478 GGAGGCTGCCCCGCCTGAGCTACCATTGACTCTGCGGCATAATGAGCGGACGCGGGCAGG 8537 | ||||||||||||| | | |||||| | | ||| |||| Sbjct 4634 GAAGGCTGCCCCGCCCGGACCACCATT-----------------ATCTGACAGGGGC--- 4673 Query 8538 ATGCACGGAATGCCATCTGCACGACTGACCACACACCACACCATAATCTGGCGCTCTGTG 8597 | | || |||| |||| | || || ||| |||| Sbjct 4674 --------TAAGGTATAAGCAC---------CACAGC---CCGAAAAATGG----GTGTG 4709 Query 8598 GCATTGATTGCGAC-ACaaaaa--aaGACGCGTGGCGCGTCATATGTCGCCTGTGAA-TT 8653 | ||| || || ||| ||| ||||||| ||||||||| |||||||| |||| | Sbjct 4710 CC--TGA--GCAACGACATAAAAAAAGACGCATGGCGCGTCTGGTGTCGCCT-TGAAGTA 4764 Query 8654 GCTCGGGTTCTCACGCCCGGCTGCCGATTTTGCGGCAGGCGAAAAACTATATCCGCAAAT 8713 ||||||||| |||||||||||||||||||||| ||| | |||||||| | | ||| Sbjct 4765 ACTCGGGTTCCTACGCCCGGCTGCCGATTTTGCGACAGCGGGGAAACTATACCTGGAAAC 4824 Query 8714 GCCGGAAAAAGGCAAGCCAGAAAAAGGGAGTTTTTGCAGAGCGGGCATCATCATGCGTCG 8773 | || ||| | ||||||||||||||||| | ||||| || || |||||||||||||| Sbjct 4825 GGCGAAAAGAAGCAAGCCAGAAAAAGGGGCTGTTTGCTGAATGGTCATCATCATGCGTCA 4884 Query 8774 TACCCCCGTTTGCGTCCGGCAANNNNNNNNNNNNNNNNNNNNGTGACTTCAGAGTGCAGC 8833 || ||||| |||||| |||||| |||| |||||| ||| | Sbjct 4885 TAGCCCCGGTTGCGTTCGGCAATGCGGTCAGTCATCCATGCGGTGATTTCAGACTGCGCC 4944 Query 8834 CAGGCCACATTTTTACCGCCAAGACTCACCTGCGGCGGAAATTCCCCCTTACGGATGAGT 8893 || ||||| ||||| ||||| || || | || ||| || || | | |||||| Sbjct 4945 CACGCCACGTTTTTTCCGCCCAGGCTGATTTGTTTCGGGAAAGCCTCGCGGCTGATGAGG 5004 Query 8894 TCGTAGATGGTCGAGCGTGACAGGCCGCACAGGTGCATCACTTCCGGCACACGTAAAAAA 8953 ||||| ||||| || || |||||||||||||| ||||||||||| |||| || | ||| Sbjct 5005 TCGTAAATGGTTGACCGGGACAGGCCGCACAGATGCATCACTTCAGGCAGGCGGATAAAG 5064 Query 8954 CGCTCCTGCGTGATGTCCGGCAGCGGCATCAGTGGCGTCACTGGGGCGGGAGACGGGGAA 9013 |||||||| | || | || ||||||||| |||| | ||||| | |||||||||| Sbjct 5065 CGCTCCTGAACGGCATCAGACACCGGCATCAGCGGCGCGGCAGGGGCAGAAGACGGGGAA 5124 Query 9014 GAAAAAACAGCTTGCATCGGGCTACCTCGTTAATGTCCATACAGCACCGGATAAGTCCGT 9073 |||||| | | |||||||||||||||| || ||||||||| |||| |||||| Sbjct 5125 GAAAAAGCGGTGTGCATCGGGCTACCTC-ACAAAGTCCATACAATGCCGGTCGTGTCCGT 5183 Query 9074 CCGGCTTCGGGTAGCGCTTTATTTTGTGAATATTTTC 9110 ||||||||||||||| || |||||||||||||||||| Sbjct 5184 CCGGCTTCGGGTAGCTCTCTATTTTGTGAATATTTTC 5220 Score = 475 bits (526), Expect = 3e-130 Identities = 724/1020 (71%), Gaps = 21/1020 (2%) Strand=Plus/Plus Query 9310 GGTGAACAGTGGTGAACAGACGGTGAACAGTCATTACTGCGATTGTTCACCCTTTAACTT 9369 |||||||||| |||||||| ||||||||||| || | | | ||||||||||||| ||| Sbjct 5411 GGTGAACAGTAGTGAACAGTCGGTGAACAGTTATACCCTCAACTGTTCACCCTTTATCTT 5470 Query 9370 ACTGTATTACTTATCTTTTTTATTAAGGTGAACAGAGGTGAACAGTAAAATATaaaaaaa 9429 ||||||||||||||||||| || |||||||| ||||| ||| | | |||||||| Sbjct 5471 GCTGTATTACTTATCTTTTTCTTTTCAGTGAACAGTAGTGAATAGTTATAAGTAAAAAAA 5530 Query 9430 CAAACAGTAAGCCGGTTTTTCCTGCGACCTTTTCCTGGCTTGCCGG-TCTGAGGATGAGT 9488 ||||| || || | |||||||| ||||||| ||||| ||||| | | | | | || Sbjct 5531 CAAACGGTGAGTAAGATTTTCCTGAGACCTTTCTCTGGCAAGCCGGGTTTTAAGGTCTGT 5590 Query 9489 CTCCTGTGTCAGGGCTGGCACATCTGCAATGCGTCGTGTTGTTGT--CCGGTGTACGTCA 9546 | |||||| || |||| | ||||| |||||||||||| | || | || || Sbjct 5591 TT---GTGTCATTTTTGCCACAACGCCAATGAATCGTGTTGTTGTGTCTGGCG--CGGCA 5645 Query 9547 CAATTTTCTTAACCTGAAGTGACGAGGAGCCGGAAAATGTCT--GACCACACT-ATCCCT 9603 ||| | || | |||| || |||||| | | ||| || |||| | | || || Sbjct 5646 GAATCTCCTCAGATTGAAACGAAGAGGAGACCCGACATGACTCAGACCGCTGTTATTCCC 5705 Query 9604 GAATATCTGCAACCCGCACTGGCACAACTGGAAAAGGCCAGAGCCGCCCATCTTGAGAAC 9663 || || || |||| ||| ||| || || || | ||| | | || ||||| | || Sbjct 5706 GACTACCTTAAACCTGCAATGGAACGCCTTGAGACTGCCCGCTCGGCGCATCTCGCCAAT 5765 Query 9664 GCCCGCCTGATGGATGAGACCGTCACGGCCATTGAACGGGCAGA-GCA---GGaaaaaaa 9719 ||| ||| |||||||||||| |||||||| | | ||| ||| | ||||||| Sbjct 5766 GCCAGCCGTATGGATGAGACCACGACGGCCAT----CAGCCAGGTGCAAATGCAAAAAAA 5821 Query 9720 TGCGCTGGCGCAGGCCGACGGAAACGACGCTGACGACTGGCGCACGGCCTTTCGTGCAGC 9779 || |||| ||||| |||| || || | | || ||||| | ||||||||||| | Sbjct 5822 TGAACTGGAGCAGGAAAACGGCAATGATTCCGGCGCATGGCGTAGCGCCTTTCGTGCCGG 5881 Query 9780 CGGTGGTGTCCTGAGCGACGAGCTGAAACAGCGCCACATTGAGCGCGTGGCACGCCGGGA 9839 |||| |||| | | |||||||||||||| ||||| | | |||||||||||| ||||| Sbjct 5882 TGGTGCTGTCATTACTGACGAGCTGAAACAACGCCATCTGGCGCGCGTGGCACGGCGGGA 5941 Query 9840 GCTGGTACAGGAATATGACAATCTGGCCGTGGTGCTGAATTTCGAACGTGAACGCCTGAA 9899 |||| ||||||| ||||||| |||| | ||| ||| ||| || | || |||| || Sbjct 5942 ACTGGCGCAGGAATGTGACAATATGGCTGAGGTTCTGTCTTTTGAGCTGGACAGCCTTAA 6001 Query 9900 AGGGGCGTGTGACAGCACGGCCACCGCCTACCGGAAGGCACATCATCACCTTCTGAGTCT 9959 ||| ||||||||| | ||||||| || || || |||||||||| | | || || | Sbjct 6002 AGGAGCGTGTGACCGGACGGCCAGAGCGTATCGTCAGGCACATCACATCGTCCTCAGCCA 6061 Query 9960 GTATGCAGAGCATGAGCTGGAACACGCCCTGAATGAAACCTGTGAGGCGCTTGTCCGGGC 10019 |||||||||||||||||| || |||||| ||| |||||| ||||| ||| |||| Sbjct 6062 GTATGCAGAGCATGAGCTTGATGTTGCCCTGCGTGACACCTGTAGCGCGCTGGTCAGGGC 6121 Query 10020 AATGCATCTGAGCATTCTGGTACAGGAAAATCCGCTCGCCAACACCACCGGCCATCAGGG 10079 |||| | || | ||| ||||| | | | || ||||| ||||| |||||||| |||||||| Sbjct 6122 AATGAAACTCAACATACTGGTTCTGAATAACCCGCTAGCCAATACCACCGGGCATCAGGG 6181 Query 10080 CTACGTCGCACCGGAAAAGGCTGTCATGCAGCAGGTGAAATCATCGCTGGAACAGAAAAT 10139 ||| || || ||| |||| || ||||||||||||||| ||| || ||| | Sbjct 6182 CTATATCCAGCCAGAACAGGCCGTTATGCAGCAGGTGAAAGACCGGCTTGAGCAGGCGGT 6241 Query 10140 TAAACAGATGC-AAATCAGCCTCACCGGCGAGCCGGTTCTCCGGCTGACCGGACTGTCAG 10198 ||| | ||| | ||| | || |||| || ||||| || || |||||||| | Sbjct 6242 GAAA-GGCTGCGATATCCGTCTGACCGATGAACCGGTGCTGTTTAAAACAGGACTGTCGG 6300 Query 10199 CGGCAACACTCCCGCACATGGATTATGAGGTGGCAGGCACACCGGCACAGCGCAAGGTGT 10258 | | || || ||||| ||||| |||| || || | ||| || | ||||| || || | Sbjct 6301 CCTCCACGCTGCCGCATATGGAGCATGACGTTGCGGCCACGCCCGTTCAGCGGAAAGTCT 6360 Query 10259 GGCAGGACAAAATAGACCAGCAGGGAGCAGAGCTTAAGGCCAGAGGGCTGCTGTCATGAT 10318 ||||||| ||||| | | | ||| || || || || | ||||| |||||||||| Sbjct 6361 GGCAGGAAAAAATGCGGGAACGTGAAGCTGACCTGAAAGCACGGGGGCTACTGTCATGAT 6420 Score = 349 bits (386), Expect = 3e-92 Identities = 525/735 (71%), Gaps = 21/735 (3%) Strand=Plus/Plus Query 10901 CCTTACAGCAGGCCTTTGACACCTGTCAGAATAACAAAGCAGCATGGCTGCAACGCAAAA 10960 ||||||||||||||| |||| ||||||||| |||||| | || |||||| | || ||| Sbjct 6691 CCTTACAGCAGGCCTATGACGCCTGTCAGACGAACAAAACCGCGTGGCTGAACCGTAAAG 6750 Query 10961 ATGAGCTGGCAGCGGCCGAACAGGAATATCTGCGGCTTCTGTCAGGAGAAGGCAGAAACG 11020 || ||| | || || || |||||||||| | | || | | ||| | || | | Sbjct 6751 CCGAACTGACCGCCGCAGAGCAGGAATATCAG-GAATTATTGCTGGATGA--CA-ATGCA 6806 Query 11021 TCAGTCGCCTG--GACGAATTACGCA-----ATATTATCGAAGTCAGAAAATGGCAGGTG 11073 |||| | || | || | |||| | | || || |||| ||||||| |||| Sbjct 6807 TCAGGCTCCCGCAGATTACAGACGCTGCGTGACCTGATTGACGTCAAAAAATGGGAGGTC 6866 Query 11074 AATCAGGCCGCCGGTCGTTATATTCGTTCGCATGAAGCCGTTCAGCACATCAGCATCCGC 11133 ||||||||||||||||| || || |||||||| | || |||| |||||||||||| Sbjct 6867 AATCAGGCCGCCGGTCGCTACATCTTCTCGCATGAGGAGGTGCAGCGCATCAGCATCCGT 6926 Query 11134 GACCGGCTGAATGATTTTATGCAGCAGCACGGCACAGCACTGGCGGCCGCACTGGCACCG 11193 |||||||| |||||||||||||||| ||||| ||| ||| | ||||||||||||||| Sbjct 6927 AACCGGCTGCGTGATTTTATGCAGCAGAACGGCGCAGAGCTGACCGCCGCACTGGCACCG 6986 Query 11194 GAGCTGATGGGCTACAGTGAGCTGACGGCCATTGCCCGAAACTGTGCCATACAGCGTGCC 11253 ||||||||||| | | | | | || || ||| | || | | ||| | Sbjct 6987 GAGCTGATGGGGATTAAAAACCAGCCCGCGATGATAAAAAATCGCGCGCTTGACCGTTCA 7046 Query 11254 ACAGATGCCCTGCGTGAAGCCCTT-CTGTCCTGGCTTGCGAAGGGTGAAAAA---ATTAA 11309 | |||| | ||||| ||| | ||| ||||| || | || ||| ||||| Sbjct 7047 GTCTCTTTCCTGAGAGAAGCTCTTTCCGTC-TGGCT---GACCGCTGGAAATGACATTAA 7102 Query 11310 TTATTCCGCACAGGATAGCGACATTTTAACGACCATCGGATTCAGGCCTGACGTGGCTTC 11369 |||||| |||||||||| || ||||||||| ||||||||| |||||||||| | |||| Sbjct 7103 TTATTCTGCACAGGATAAAGATATTTTAACGGCCATCGGATACAGGCCTGACACGCCTTC 7162 Query 11370 GGTGGATGACAGCCGTGAAAAATTCACCCCTGCGCAGAACATGATTTTTTCGCGTAAAAG 11429 | |||||| | |||||||||||||||||||| ||||||||||||| | || | | Sbjct 7163 GCGGGATGATAATCGTGAAAAATTCACCCCTGCACAGAACATGATTTACACCCGACGACG 7222 Query 11430 TGCGCAACTGGCATCACGTCAGTCAGTGTAAAATTCCCCGAAAATCCGCCCGTTTTTACT 11489 || |||||| | | || | || |||| ||||| |||||| | |||||| Sbjct 7223 CGCCGGACTGGCCGCGCAGTAGCCTGTCAAAAAATCCCCATAAATCCCGCTATTTTTAAC 7282 Query 11490 GAAAAAAGCCATGCATCGATAAGGTGCATGGCTTTGCATGCGTTTTCCTGCCTCATTTTC 11549 ||| |||||||||||| ||||||||||||| |||||||||||||||| | | | | | | Sbjct 7283 CAAATAAGCCATGCATCCATAAGGTGCATGGTTTTGCATGCGTTTTCCCGAC-CCTGTAC 7341 Query 11550 TGCAAACC-GCGCCATTCCCGGCGCGGTCTGAGCGTGTCAGTGCAACTGCATTAAAACCG 11608 | | || |||||| || |||||||| |||| | | ||| ||||||||||| || Sbjct 7342 TCCCTGCCAGCGCCAGTCGCGGCGCGGCCTGAATCTACCTTTGCTCCTGCATTAAAAGCG 7401 Query 11609 CCCCGCAAAGCGGGC 11623 ||| |||||||| Sbjct 7402 GCCCCTTAAGCGGGC 7416 >seq2982 Length=1456 Score = 120 bits (132), Expect = 2e-23 Identities = 192/273 (70%), Gaps = 11/273 (4%) Strand=Plus/Minus Query 3687 AAGCTTTTTA---GCTTCATCGCGTTTTGCTCTTGCCTGAGCAAGCGTCACAGTAGGCCA 3743 ||||||||| || || || || ||| || || || ||||| | ||| | || | Sbjct 519 AAGCTTTTTCTTGGCGTCGTCACGCAGTGCCCTCGCTTGTGCAAGGGACACTGCCGGATA 460 Query 3744 AACACCAAACGCAAGACGATCCTCTTTTTTGTCAGAGGGACGTCTGTATTTCATGCGCCA 3803 |||||||| || | ||| | ||||||| | || || |||||||| ||||| Sbjct 459 GACACCAAAGGCCATACGCTTCTCTTTTCCATTGAAGCGA------TATTTCATCCGCCA 406 Query 3804 GTATTTGGAACCTTTGGCCGAAACCTCAAGATACAAACCACCACCATCGGCCATTTTGTA 3863 |||| ||||||| || ||||||||||||||||||| ||||||| |||| || || Sbjct 405 GTATCTGGAACCAGAGGGAACAACCTCAAGATACAAACCAGCACCATCTGCCAGCTTATA 346 Query 3864 GGTTTTGTCTTTTGGCTTTGCGGTCTCGACCTGTCTGGCGTTGAGCTTCATTTGGGGGCA 3923 || ||| ||| | || || || | || ||||||| || || || |||| ||||||||| Sbjct 345 GGCTTTCTCTCTGGGTTTAGCTGCGTCTACCTGTCGCGCATTAAGTTTCA-TTGGGGGCA 287 Query 3924 CATTTCTA-ATCGAAGTTAAGATGCCCCCAATT 3955 | ||| | |||| || ||||||||| || Sbjct 286 TCTCCCTAGACCGAACACAAAATGCCCCCACTT 254 >seq955 Length=28751 Score = 113 bits (124), Expect = 3e-21 Identities = 96/117 (82%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 8390 AATAACGCTATCGCCGGAGTTCTCACGCTCGATGGCGATAGCCCAGACGGGGGTGAGAAT 8449 || ||||||||| ||| ||||| |||||| ||| |||||||||||||||||| |||| Sbjct 14828 AAAAACGCTATCACCG-AGTTCCTACGCTCATTGGTGATAGCCCAGACGGGGGTAGGAAT 14886 Query 8450 ACCGGCTTCACAGGATACCGGCCAGCCCGGAGGCTGCCCCGCCTGAGCTACCATTGA 8506 |||||| ||| ||| ||||||||| | | ||||||||||||||||||||| || Sbjct 14887 ACCGGCGTCATCGGAAACCGGCCAGGCTAATGCCTGCCCCGCCTGAGCTACCATAGA 14943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37078356935968