Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq54 345 5e-90 seq1819 284 1e-71 seq332 284 1e-71 seq222 174 2e-38 seq3596 161 1e-34 >seq54 Length=99412 Score = 345 bits (382), Expect = 5e-90 Identities = 624/898 (69%), Gaps = 22/898 (2%) Strand=Plus/Minus Query 23843 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATT 23902 ||||||||||||||| || |||||||| || ||||| ||||| |||| || || || | Sbjct 88915 TTTTTGGTATTCACCTACGCGTTTTTCAAAGAAATTGGTTTTCCCTTGTAGGGAGATCAT 88856 Query 23903 TTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCC-AATTCA-GAA 23960 ||||| || ||| |||||||||| || || || | ||| || ||| |||||| | | Sbjct 88855 CTCCATAAAGTCGAATGGATTGGTCACGTTGTATAC-CTTAGAACACCCTAATTCAAGTA 88797 Query 23961 ATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATA 24020 || || | ||| ||||||||||| || || |||||||| || |||||| || || Sbjct 88796 AT-AACCGATCAGCGACAAACTCGATGTACTGTTTCATCAAGTCGGCATTCATGCCAATG 88738 Query 24021 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 24080 || ||||| || | || |||| | |||||| |||||||| | || || || || ||| Sbjct 88737 AGCTTAACAGGTAATGCATCAGTGACAAATTCCTGTTCAATTGCTACTGCATCGGTAATA 88678 Query 24081 ATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTT---TAAACATCAAACAT 24137 || | |||| |||||| || ||| ||| || | || ||| | || Sbjct 88677 ATTTCTTTTACCCTTTCTTGTGGAAGTTGATTTTTTAAGTGCTTGGTATACAATAGGCAA 88618 Query 24138 GCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCG 24197 || || || || || | || ||||| ||| ||| | ||||||||| || | || ||| Sbjct 88617 GCAAAGTCACAATGCAATCCTTCGTCCCTAGAAATGAGTTCGTTGGAGAAGCTAAGACCG 88558 Query 24198 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT-CCAGAAAAGAAAAT 24256 ||||||| || | ||||| ||||| || || || ||||| | | ||||| |||||||| Sbjct 88557 GGCATTAATCCCCTTTTTTTGAGCCAGAAGATCGA-GCAAAAGCTACCAGAGAAGAAAAT 88499 Query 24257 TCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCATGTATCCA 24316 |||||||| || ||||||||||| |||||||| || ||| |||| | | |||||| Sbjct 88498 GCCTTCTACAGCTGCAAAGGCAATGAGTCTTTCAGCAAAAC--TCGCT-TGGTCTATCCA 88442 Query 24317 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 24376 | |||||| || || || || || ||||| | || || || ||||| || || Sbjct 88441 ACGTAAAGCCCATTCTGCTTTTTTCTTAACACAGTCGAGGGTGTCGATGGCATTGAAAAG 88382 Query 24377 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 24436 ||| |||| | | ||| |||| || |||||||| | || ||| |||| || Sbjct 88381 GCGATTTCTTTCTTGAGGATCCTTAATGTAGGTATCAATGAGGAGTGAATAGGTTTCTGA 88322 Query 24437 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 24496 ||| || || || | || || || || || || || || | ||||| ||| |||||| Sbjct 88321 ATGGATATTCTCTACAGCAATCTGGAAGCCATAAAAGAATTTGGCCTCTGTATACTGTAC 88262 Query 24497 TTC-TATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 24555 ||| |||||| | |||||||||||||||||| || || |||||||| |||||||| | Sbjct 88261 TTCAGCTACAAAGT-TTTCTGCTAAATTTTCATTAACAATACCGTCACTAGCTGCAAAGA 88203 Query 24556 ACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTA----TTCCAATCA 24611 | |||||||| || ||||| | | ||| || |||| | | ||| || Sbjct 88202 AAGCCAATACGTGAGAGATAAAGTGTCGTTCATC----GTTATTCAAGCGGGCCCAGTCT 88147 Query 24612 TTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 24671 |||| |||| | || || | || || | |||||||| || ||||| || ||| Sbjct 88146 TTGAGGTCTTGACTTAAGTCAATCTCCTCAGCGGTCCAAAAGCTAGCTTCTGCTTTCTTA 88087 Query 24672 TACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTT 24729 || | ||||| || ||||||| || || || || | ||||||| |||| ||||| Sbjct 88086 TAAAAGTTCCATATATCATGATGTTCGATAGGGAATAATACAAATCGATTTTTATTTT 88029 Score = 309 bits (342), Expect = 4e-79 Identities = 816/1222 (67%), Gaps = 33/1222 (3%) Strand=Plus/Minus Query 53448 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 53507 |||||||||| || ||||| | |||||||| || ||||||| | | |||||| || Sbjct 90632 AATAAATGGTCTCAAAGATGTCCTTATTTAACTCACGTGCTTCTATGGAATCAAAAGGC- 90574 Query 53508 AATT--TAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATG 53565 ||| ||| | ||| | || ||||||||||| || ||||| || || || | || Sbjct 90573 -ATTCGTAACTTTAAAAAGGTATCCGCTAATCCTTGCACCCCAATGCCAATGGGGCGGTG 90515 Query 53566 TCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT 53625 || ||| ||| || ||||| |||| || |||||||| ||||| || ||||| || Sbjct 90514 TCGGAAATTCGAGGTTCTTGCTTCAGGAACCGGGTAATAATTGATATCGATGATTTTGTT 90455 Query 53626 GAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCA-T 53684 ||| ||| || | ||| | | | || | ||| || || ||||||||| ||| | Sbjct 90454 GAGATTTTTGGTAGCTACATAGCTAATCTCATACAGCTTTTGATGATCAAATTGGCCAGT 90395 Query 53685 C-TATT-ACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGC 53742 | ||| | ||| || || |||||||| ||||| || || || || ||||||| | Sbjct 90394 CGCATTGATAAATTTGGGTAAAGCAATAGAGGCCAGGTTGCACACCGCAACCTCATCGGG 90335 Query 53743 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 53802 | ||| | || || ||||| || || || || |||| || ||||||||||||| Sbjct 90334 TGATGTATACTCGATGATTTCAGTACATAGGTTGCTTGACTTAATAGTTCCTAAATTTTT 90275 Query 53803 TTGATTACTCTTTTTGTT-ACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAA 53861 ||||| ||| | || ||| |||||||| | || | ||| | || ||||| | Sbjct 90274 CTGATTCGATTTTCTATTGGCAC-TGTCCTTATACAACATATAAGGCATGCCCGTTTCGA 90216 Query 53862 TCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTT--GTATCT 53919 |||||| |||| || || ||| | | | | ||||| || ||||| | || Sbjct 90215 TCTGGGCCTCTAGGATGGCAAACCACAGTTCTTGTG-CTTTA--ATGGATTTTCGGGCCT 90159 Query 53920 CT-TTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGT-CC 53977 | ||||| ||| || |||||| || |||||| | ||| || |||| | | || Sbjct 90158 TTCCTTCTCGTTCATACTTTGTATATAAGGCTTCAAAGGCTTCT-CCATAACAGTCTGCC 90100 Query 53978 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 54037 | ||| || ||||| || || | | |||||| ||| | | | || || |||| | Sbjct 90099 AGTCCCGGTGCTTCATTGGGGCAAAAGAGCGACCATTCTTCATTGTTCTCTACACGTTGC 90040 Query 54038 ATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTT 54096 || || || |||| |||||| || || ||| || || || | | | || || || Sbjct 90039 ATGAAAAGGTCAGAAATCCAGAGGGC-ATAGAACAGGTCGCGTGCACGCAACTCTTCTTT 89981 Query 54097 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 54156 || ||| ||| || || | ||| | | |||||||| ||||| |||||||| || Sbjct 89980 GCCGTGATTTTTTCGTAGGTCTAAAAACTCAAAAATATCAGCGTGCCAAGGTTCCAAATA 89921 Query 54157 TATGGTCATAACTCCAGGCCGTTTGT--TTCCTCCC---TGATCTATGTATCTAGCGGTG 54211 |||| || |||| || ||| | |||||||| || |||| ||| | |||||| Sbjct 89920 AATGG-CAAAACT----TCCTTTTCTTCTTCCTCCCCCTTGGTCTACGTAGCGAGCGGTC 89866 Query 54212 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATA 54271 ||| | | | | ||| || | ||| |||||||| | |||||||| || || Sbjct 89865 ATATCAAAGTTGCGTAGCATGGGTACAATGCCATTGGAAACCCCATTGGTTCCTTTAATG 89806 Query 54272 TAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAG 54331 || || | ||||| |||| | ||| || || | || |||||| || || Sbjct 89805 TAAGAGCCTGTTGCACGGATATCATGAATACTTAATCCCACGCCACCTGCCGATTGTGAA 89746 Query 54332 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTA 54391 ||| || || ||||||| |||||||||||||| || || ||||| ||| ||||| | Sbjct 89745 ATTTTAGCACACTGTTTTAAAGTATCATAGATGCCATCAATGCTATCTTCCTTCATGGTG 89686 Query 54392 AGTAGAAAACAGCTAGACA--TTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 54449 || || |||||| || | | |||| | | ||||| |||||||| | |||||| | Sbjct 89685 AGCAGGAAACAGGAGGATAGCTGTGGTTTAGGC--GTTCCTGCATTAAAAAGGGTAGGGG 89628 Query 54450 AAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATAT 54509 ||| || |||||||| ||||| || || || | ||| || | ||| ||||| |||| Sbjct 89627 TAGCATGTGTAAACCACTTTTCGGAGAGCAGGTGGTAGGTTTGGATGGCTGATGTGATAT 89568 Query 54510 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 54569 | || ||||| ||||| || || ||||| | ||| ||||| |||||||| || || | Sbjct 89567 CTTCTTTGTGAATGCCTACGGCCACCCGCATGAGCATATGCTGCGGTCTTTCCACAATTT 89508 Query 54570 TGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATG 54629 | | || || || | || || |||| || || ||||| ||||| || | || Sbjct 89507 TACCATGTAGCTTGAGTAGATATGACCTTTCTAAGGTCTTAAAGCCAAAGTAATCATAAT 89448 Query 54630 AAAAGTCTCGTTCGTAAATAAT 54651 | | ||||| || |||| ||| Sbjct 89447 CATAATCTCGATCATAAACAAT 89426 Score = 89.7 bits (98), Expect = 6e-13 Identities = 160/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 54785 GTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGT 54844 ||| ||||||||| || || ||||| || | ||| |||| || | ||| ||||||||| Sbjct 89292 GTTACTTTGTGTAAGTTAGAGACGGCAATACGAGCTGCTAAAACCGAATAGTCCGGATGT 89233 Query 54845 TGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACT 54904 | || | | ||| ||||||||||| | | | |||| ||||| | ||| || || Sbjct 89232 TTAGTCGCCATGGAGGCGGCTATTTCGGCAGCTAAATTGTCTAATTCGATCGTAGTGACC 89173 Query 54905 CCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTG 54964 || ||| || || || |||||||| || || | | | || |||| | || Sbjct 89172 TTATCATAAATGCCAGCAATTACCTTCATGGCAATGTCTACCGCATTGATATAGTTTGTA 89113 Query 54965 TTTAAGCCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGACA 55018 |||||||| ||| | |||| ||| | | |||||| ||||||||| | ||| Sbjct 89112 TTTAAGCCTGTACAGAGTTTTTCAATTCTTGCTGTGATCTTATCAAACTTAACA 89059 Score = 89.7 bits (98), Expect = 6e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 52805 AATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTT 52864 || ||||| | ||||| | | | ||||||| ||| || || || |||| ||| || ||| Sbjct 91281 AAAGTGAACTTAATGGCATCCGCTGCGGGTCGCGTTCGAAGGTAATACAGTCCTGTCTTT 91222 Query 52865 AGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCT 52924 ||||| |||| | || |||||||| || ||||| | | | | | ||| Sbjct 91221 AGACCTTTCTTCCAAGCATAGAAATGCATCGAAGTAAGTTTCGCAAAGTTGGCGTCTAGC 91162 Query 52925 ATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 52984 | ||||||||||| ||| |||||| ||||||||| || | || || ||||| | Sbjct 91161 AAGTGGATATTCATGCTTTGGCTTTGACAGATGAAGGCACCTCGATCGGCCGCCATGTCA 91102 Query 52985 ATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTAT 53021 ||||| | ||||| || |||||||| | ||| ||| Sbjct 91101 ATGATGGCTTTTTGAGGGATTTCCCACACCGTTCTAT 91065 >seq1819 Length=3716 Score = 284 bits (314), Expect = 1e-71 Identities = 806/1223 (66%), Gaps = 24/1223 (2%) Strand=Plus/Plus Query 53441 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 53500 ||| || ||||||| ||||| || || | ||||||| | || ||| | || ||| Sbjct 1660 GCAGCGAAATAAATCGTTTCAAAAATTTCTTTATTTAAAATTTTTGCCCCTTCACTTTCA 1719 Query 53501 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 53560 ||||| || | || ||||| || ||||| ||||| || ||||| | ||| | ||| Sbjct 1720 AATGGTAAACGCATCAGGATAAAAGCATCTGCCAATCCCTGTACACCTAAACCAACTGGT 1779 Query 53561 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 53620 || || | | | || || ||| |||||| | |||||||||||| ||| |||||| Sbjct 1780 CTGTGGCGCATGTTGGAATTTTTAGCTTCCTCTACCGGATAATAATTATGATCAATAATT 1839 Query 53621 TTATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGT 53680 ||||| ||||| | | | | ||||| | | ||| || |||||| | | Sbjct 1840 TTATTCAGGTTCAGGGTAGCCTGATAGGTTACATCATATAATTTCTGATGATCAAACTCT 1899 Query 53681 CCATCTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCAT-- 53738 || | || ||||| | ||| || | || ||||| ||||| || || ||||| | Sbjct 1900 CCGTTGATGACAAATCTTGGCAAAGCCAACGAGGCCAGGTTACATACAGCAACCTCGTCT 1959 Query 53739 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 53798 | | | | ||| | ||| || || || ||||| || || |||||||||||||||| Sbjct 1960 TTGGAA--GTATACTCTATAATTTCTGTACAAAGGTTGGAACTTTTGATGGTTCCTAAAT 2017 Query 53799 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTT 53858 |||| || || || |||| ||||| ||||| | | | || || || |||| Sbjct 2018 TTTGCTGGTTGGATTTGCTGTTTGCTGCATCTTTATACAACAGATAAGGGGTTCCGGTTT 2077 Query 53859 CAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTT----G 53914 ||||||| || || | ||| || ||| | | | || |||| || | ||| | Sbjct 2078 CAATCTGTGAATCCAGAATGGCAAACCAAAGCTCTTGTGC-TTTA--ATGGTTTTACGGG 2134 Query 53915 TATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTG 53974 | || || || ||||||| | ||| || || || || | || || || | Sbjct 2135 CACGTCCTT-CTTTTTCGTAACGCTCATATAAAGCATCGAATTCTGCACCA-AAGCAATC 2192 Query 53975 T-CCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 54033 | ||| ||| || ||||| ||||| | || ||| ||||||| || | || | Sbjct 2193 TGCCAGTCCCGGGGCTTCATGAGGACAGAATAAACTCCAGTCTCCGTTTTCTTCTACCCT 2252 Query 54034 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCT 54092 | |||| || || ||| | |||||| || ||| |||| |||||||| | | |||| | Sbjct 2253 TCTCATGAACAGGTCACATACCCAAAGGGC-ATAGAATAAATCTCTGGCACGAAGTTCTT 2311 Query 54093 CGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGCCATAATATCAGAATGCCACGGTT 54149 | || || || |||||| || || || || || | ||| | |||||| || | Sbjct 2312 CTTTACC---ATGGTTTTTACGCAGGTCCAGAAAACTCAGCACATCTGCATGCCATGGCT 2368 Query 54150 CCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 54209 ||| ||| |||| | | | || ||||| ||| ||||| || | || | |||| Sbjct 2369 CCAGGTAAATGGCAAAAGCACCTTTACGTTTACCTCCACCCTGGTCCACATAACGGGCGG 2428 Query 54210 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGA 54269 | | ||| | ||| ||||||| || | ||| |||||| | || || || || | Sbjct 2429 TATCGTTAAATACTTTCAACATAGGTACAATCCCATTGCTGGTCCCGTTTGTTCCACCAA 2488 Query 54270 TATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAG 54329 |||| ||| ||||||| || ||| || || ||| || || ||||| ||| | Sbjct 2489 TATAAGATCCCGTGGCACGGATGTTATGGATGCTTAAACCAATACCACCTGCGCTTTGTG 2548 Query 54330 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGT 54389 | ||| ||| | ||||||| ||||| || || || || ||||| || ||| |||| Sbjct 2549 AAATTTTAGCGGTTTGTTTTAAAGTATCGTAAATTCCTTCAATACTGTCGTCCTGCATGG 2608 Query 54390 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 54449 | |||| ||| ||| ||||||||| | | || | ||||||||||| || || | Sbjct 2609 TCAGTAAAAAGCAGGAAGACATTTGAGGTTTAGGGGTAGCTGCATTAAATAAAGTTGGGG 2668 Query 54450 AAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATAT 54509 || ||||||||||| ||| | || || ||||| | || || || |||| Sbjct 2669 TTGCATGCGTAAACCAGCGCTCACTCATCAGGTTATACGTTGCAATCGCACTTTCAATAT 2728 Query 54510 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 54569 | || ||||| ||||| || |||||||| |||| || || || | ||| || || | Sbjct 2729 CTTCTTTGTGAATCCCTACGGCAACACGCATAAACAAATGTTGCGGGCGTTCTACAAT-T 2787 Query 54570 TGTTGTT-TATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 54628 ||| || ||||||||||| ||||||||||| | |||||||| |||||||| | | || Sbjct 2788 TGTCCTTCTATTTTCAGCAGATAGGATTTTTCAAGGGTTTTAAACCCAAAATAATCGAAT 2847 Query 54629 GAAAAGTCTCGTTCGTAAATAAT 54651 ||| || | || |||||||| Sbjct 2848 CCAAAATCCCTGTCATAAATAAT 2870 Score = 107 bits (118), Expect = 2e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 23842 TTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATAT 23901 ||||||| || |||||||||||||| || || ||||| ||||| |||| | || || Sbjct 3444 TTTTTTGATAATCACCCACACGTTTCTCAAAGAAATTGGTTTTGCCTTGCAGGGAGATCA 3503 Query 23902 TTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAA 23961 | ||||| ||||| | |||||||| ||| ||| ||| | || | |||| ||| | Sbjct 3504 TCTCCATAAAATCAAACGGATTGGTGGCATGATATATTTTGGTATAACCCAGTTCCTGCA 3563 Query 23962 TCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAA 24021 | |||| ||||| |||||||| ||||| | ||||| || |||||| || || | Sbjct 3564 GCCATCTGTCTGCAACAAACTCAATATACTGTGACATCAGTTTTGCATTCATCCCGATCA 3623 Query 24022 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTC 24073 | ||| || | || | |||| |||||| | ||| || |||||||| Sbjct 3624 GGGCAACCGGCAAGGCATCTGTAATAAATTCCTTTTCGATTTCTACCGCGTC 3675 >seq332 Length=17232 Score = 284 bits (314), Expect = 1e-71 Identities = 1188/1856 (64%), Gaps = 57/1856 (3%) Strand=Plus/Minus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 ||||||||||| | | | || ||| | ||||| ||||||||||| || ||||| | Sbjct 6225 GTGAATTGAATTGCATCTACAGCAGGTCTAGTACGAAGATAGTACATACCGGTTTTCAAT 6166 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927 || |||| | || |||||||| |||| ||| | | || || || || Sbjct 6165 CCTTTTTTCCAGGCATAGAAATGCATTGAAGTTAATTTAGCAAGTGAAGGTTCAGCAATG 6106 Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987 | ||| | | |||||||||||| ||||| || || || || |||||||| | ||| Sbjct 6105 AAAACATTAAAACTTTGACTTTGATCTATGAATGCACCTCTTTCAGCAGCCATATCGATG 6046 Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 53047 | | ||| |||||||||||| |||||||| | | | ||| ||||| || || Sbjct 6045 AGGGAACGTTGACGAATTTCCCAAACGGTTTTATAGAGTTGTTTATATTCTTCGGGGAGA 5986 Query 53048 TTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 53104 || |||| |||| || ||||||| | | ||| |||| || || || | || Sbjct 5985 CCTGGAATATTTTGAACGGAACCACCATTGGCTACGATCATATTTTTAATTTCCGGAGTC 5926 Query 53105 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 53164 || | ||| | | | || || | || ||| || | |||||| || Sbjct 5925 CAGAGACCCAATTCGATGAGATCTTGGAGTAATTGTTTATTGACAATGGTAAATTCACCG 5866 Query 53165 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 53224 | | || | |||| || ||||| ||||| ||||| | | | ||||||||||| Sbjct 5865 GCGAGAACACGACGAGAATAGATATTGGATGTATATGGTTCGAAACATTCATTATTTCCG 5806 Query 53225 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 53284 | ||||| | || || ||||| ||||| ||||| | | |||||||||||| | |||| Sbjct 5805 AGGATTTGTGATGTGGAGGCAGTTGGCATTGGTGCAATGAGTAAACTATTTCTTAAACCG 5746 Query 53285 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 53344 ||| ||| || | ||| || | ||||| |||| | ||| || Sbjct 5745 GTGGTTTGGATCTTTTGTTTGAGTGAAGTCCAATCCCAACGTGGGCTTGGTGTCACACCC 5686 Query 53345 NNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGG 53403 ||| |||||||| || || | || ||||| || | || || || || Sbjct 5685 CACATATCATATTGGAGAATACCTTTGGAAGCTGGAC-ATCCTGCAAAAGTTTCATAAGG 5627 Query 53404 TCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAA 53463 || || || ||||| | || || | ||| | | |||||||||||| Sbjct 5626 ACCATCTTTTTCAGCCAACTCTGCGGAAGCAGTGAGGGCAGCAAAGTAAATGGTTTCGGC 5567 Query 53464 GATCTTCTTATTTAGATCTTGTGCTTCCAGGCT--ATCAAATGGATAATTTAA-GAGAAT 53520 |||| ||||| | || | ||| ||| |||||| | ||| || || Sbjct 5566 AATCTCACGATTTACAATAGAAGCACCT--GCTGAATCGAATGGAAGACGTAATGATAAG 5509 Query 53521 AAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGAT 53580 || | || ||||| ||||||| |||||||| || ||||||||||| ||| | Sbjct 5508 AATA-CATCAGCTAAACCTTGAATTCCAATACCAATTGGTCTATGTCTGAGGTTACTCGT 5450 Query 53581 TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACAAT 53640 || |||||||||| || || ||||| |||| || || || ||||| || || ||| Sbjct 5449 TTTGGCTTCTGGAACGGGGTAGTAATTTCTATCGATGATCTTGTTGAGATTCTTGGTAAT 5390 Query 53641 TACTTT---GAC--CACATCCTTCAGTT--TGAGAAAAT--CAA---------ATTGTCC 53682 | ||| || || || || ||| ||| |||| || |||||| Sbjct 5389 GATTTTAGTGATTTCAAATAATT--GTTGATGATCAAATTCCATTTCCTTGGGATTGTCT 5332 Query 53683 -ATCTATT-------ACAA-ACATGTTC--AATGCAATAGATGCCAGATTACAAACGGCT 53731 ||| || || | | || | | ||||| ||||| | ||||||||| || Sbjct 5331 GATCCTTTCTTGTGGACGATATATTTAGGGAGAGCAATTGATGCTAAATTACAAACAGCA 5272 Query 53732 ACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTT 53791 || |||| || | ||||| | || ||||| || | ||||||||| | ||||| Sbjct 5271 ACTTCATCAGGTGATGTGTATTGGACGATTTCAGTACATAAATTACTACATTGAATGGTA 5212 Query 53792 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTA 53851 || | |||||||||||| || ||||| ||||| ||||| | || |||||| ||| Sbjct 5211 CCGAGATTTTGTTGATTGGATTTAGCATTACAAGCATCTTTATATAAAAAGAATGGAGTA 5152 Query 53852 CCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATA--- 53908 |||||||||||||| || || || || || ||||| | |||| || | | | Sbjct 5151 CCAGTTTCAATCTGAGAGTCAATGATAGCGAACCAGAGTTCTTGAGCTTTGACAACACGA 5092 Query 53909 -GATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCA 53967 || | | || | || | || || ||| ||| || ||| || ||||| | Sbjct 5091 CGAACTAAACCTGGAGTGGATT-CATAACGTTCATATAATTGTCTAAATTCATCTCCATA 5033 Query 53968 AACATT-GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCC- 54025 | |||| | | | ||| || ||||| ||||| | ||| ||||| || | ||| Sbjct 5032 A-CATTCGGCGAGTCCTGGTGCTTCATTGGGACAAAACAATGACCAATC---GGCATTGG 4977 Query 54026 -TTCA-CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTT 54082 |||| | |||| |||||||||||| | || ||| || || ||| || ||||| | | Sbjct 4976 TTTCAACACGTTCCATAAAGAGATCGGAAACCCAGAGGGC-ATAGAAAAGATCACGAGCA 4918 Query 54083 CTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGC 54142 | | ||| || ||||| ||||||||| | ||| | || | | |||||| | |||| Sbjct 4917 CGAATTTCTTCCTTTCCGTGATTCTTTTTCAAATCCAAAAATTCAAAAATATCTGCATGC 4858 Query 54143 CACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTAT 54202 || |||||||| || | || | | | || | ||| ||| || ||||||| || Sbjct 4857 CATGGTTCCAAATAAACGGCAAAAGCACCTTTTCTCTTGCCTCCACCTTGATCTACATAA 4798 Query 54203 CTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTC 54262 | |||||| | |||| | || | | |||||||| | |||||||| | |||||||| Sbjct 4797 CGAGCGGTATCATTAAAGACACGAAGCATTGGAACCAATCCATTGGAAGTTCCATTGGTA 4738 Query 54263 CCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCC 54322 || ||||| || | | |||||||| || || | | ||| || || || || Sbjct 4737 CCACGAATATAACTACGAGCAGCACGAATCTTGTGAACAGCAATACCAATACCACCAGCA 4678 Query 54323 ATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCC 54382 || || ||||| || | |||||| ||||| || || ||||| |||||||||||| Sbjct 4677 GACTTTGAAATTAAGGCAGTTTGTTTTAGGGTATCGTAAATTCCCTCGATACTATCATCC 4618 Query 54383 ATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAG 54442 |||| | | | ||||| ||||||||| || | ||| || ||||| || | Sbjct 4617 TTCATTTGTACCAAGAAACAAGAAGACATTTGAGGATAAGGAGTACCAGCATTGAAAAGT 4558 Query 54443 GTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAG 54502 ||||||| ||| || |||||| |||| || | | || || || |||| | Sbjct 4557 GTAGGAGTAGCATGAGTAAACAATTTCAATGATAATTTATCATAGGTAAGGATAACATTA 4498 Query 54503 TCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 54562 || |||||| |||||| || | | |||||||| ||||| || ||||| | ||| Sbjct 4497 TCAATATCCTCACCATGAATACCCAAAGAAACACGCATCAACATATGTTGAGGACGTTCT 4438 Query 54563 ACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 54618 || || | || ||||| | | || | |||||||||||||||||||||| Sbjct 4437 ACAATGATACCATTAATTTTGTGTAGATAACTTCTTTCCAAAGTTTTAAAACCAAA 4382 >seq222 Length=228455 Score = 174 bits (192), Expect = 2e-38 Identities = 226/304 (74%), Gaps = 9/304 (3%) Strand=Plus/Plus Query 24423 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCC 24482 ||||| | || |||||||| |||||||| || |||||||| || |||||||| | ||| Sbjct 135451 CTATAAGTCTCGGAATGAATATTTTCAATTGCAATTTGAAAACCATAGAAACAACGAGCT 135510 Query 24483 TCGGTAATCTGTACTTCTAT-ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTC 24541 || | ||| || ||||| | | || | | | |||||||||||||| || || ||||| Sbjct 135511 TCTGGAATTTGAACTTCACTCATGAATTTGGTG-GCTAAATTTTCATTAACGATACCGTC 135569 Query 24542 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTC-GTCTGGTGTTAGTT 24600 |||||||||||| || || | ||||| ||||||| | |||| | | || ||| || Sbjct 135570 ACTGGCTGCAAAGAAAGCTAGAACATGAGAGATAAAATGTCTTTCATTATCGT-TTAATT 135628 Query 24601 TATT---CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATG 24657 |||| |||||||| |||||| || | | ||| | ||| || ||||||||||||| | Sbjct 135629 TATTCTCCCAATCATAGATATCATTTGCAAGATCGATTTCCTCTGCTGTCCAAAATGAAG 135688 Query 24658 CCTCTGCCTTTTTATACATAT-TCCAGATGTCATGATATTGAATTGGAAAAATAACAAAT 24716 | || || || || || |||| ||| || ||| ||||| |||||| || | |||||| Sbjct 135689 CTTCAGCATTCTTGTA-ATATGCCCAAATATCACTATATTTAATTGGGAATAATACAAAT 135747 Query 24717 CTAT 24720 |||| Sbjct 135748 CTAT 135751 Score = 120 bits (132), Expect = 4e-22 Identities = 209/298 (70%), Gaps = 6/298 (2%) Strand=Plus/Plus Query 24132 AAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTG 24191 ||||| || |||| || |||| ||| || || | ||| || | ||| |||||||| || Sbjct 135070 AAACAGGCAAAATTACAATGTAAACCTTCATCACGACTGATAAGTTCATTGGAAAAAGTC 135129 Query 24192 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAG 24251 | ||| ||||| | || | |||||| | ||| || || || ||| ||| |||| Sbjct 135130 AATCCTGGCATCAATCCTCTCTTTTTCAACCAGAAAATCGAACAAAAACTGCCACTAAAG 135189 Query 24252 AAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCAT-G 24310 || || |||||||| || ||||| || | | | ||| || || | || | | Sbjct 135190 AATATACCTTCTACGGCTGCAAAAGCTACCAAACGTTCAGCAAAA--GATTTTGAATTTG 135247 Query 24311 TA-TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCAT 24369 || |||| | |||||||| || ||||| |||||||| || ||||| || ||||||| Sbjct 135248 TAATCCATCTCAATGCCCAATCAGCTTTCTTCTTTACACATGGAATTGTTTCAATAGCAT 135307 Query 24370 TAAAGAG-ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 24426 |||| || ||| ||||||||| || ||||| ||||||||| || || | ||||| Sbjct 135308 TAAATAGTCTAG-TTTTTTCATCTGGATTTTTAATATATGTATCGATTAATAAACTAT 135364 >seq3596 Length=2072 Score = 161 bits (178), Expect = 1e-34 Identities = 398/597 (67%), Gaps = 9/597 (2%) Strand=Plus/Plus Query 24122 TTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTT 24181 |||| | | || || || || || || || | ||||| ||||| ||| || || || Sbjct 24 TTTATAAAGCAGGCAGGCAAATTCACAATGCATCCCCTCATCTCTGGAAATCAACTCATT 83 Query 24182 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 24241 ||| || || || ||||| ||||| | ||||| | ||| || || || || | | Sbjct 84 ACTAAAGGTTAGCCCTGGCATCAGGCCTCTTTTTTTCAACCAGAAGATCGAA-CAGAAGC 142 Query 24242 TCCAGAA-AAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGG 24300 ||| | |||||||| ||||| ||||| || || || | | | ||| || || Sbjct 143 TCCCGCTGAAGAAAATGCCTTCCACTGCGGCGAAAGCCACCAAACGTTCGGCAAAATTTC 202 Query 24301 CGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCT 24360 ||| ||| ||||| ||||| || || || || ||||||||||| | |||| Sbjct 203 CGCCCTCA---ATCCAGCGCAATGCCCATTCTGCTTTTTTCTTTACACAAGGAACCGTCT 259 Query 24361 CTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAA 24420 ||| |||| || || || |||||| | | |||||||| ||| ||||| |||| | Sbjct 260 CTACGGCATGGAACAGCCTGTCTTTTTCTTCAGGATCTTTAATATAGGTATCGATCAGCA 319 Query 24421 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAG 24480 | ||| |||| || || |||||||| || || || || || || ||||| | | Sbjct 320 GCGCATAGGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAGCCATAAAAACAACGGG 379 Query 24481 CCTCGGTAATCTGTACTTCTATACAAAATCGTT--CTGCTAAATTTTCATTCACTATTCC 24538 | |||| || ||||||||| | || | ||| |||| | |||||||| || || || Sbjct 380 CTTCGGGAAGCTGTACTTCGCT-CATGA-AGTTCACTGCAAGGTTTTCATTTACAATGCC 437 Query 24539 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAG 24598 |||||| || |||||||| || | || ||| || |||| ||| ||| ||| Sbjct 438 GTCACTTGCAGCAAAAAAAGCAAGTATATGAGAAATGAAATGACGCTCGCCTGTATTTAA 497 Query 24599 TTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 24658 || | ||| | || || | ||| | || | |||||| | ||||| || ||| Sbjct 498 GTTGTCCCAGTGCTTCTGGTCATCAGAAAGGTCAATTTCTTCAGCGGTCCAGAAACTTGC 557 Query 24659 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715 || ||| |||||||| | |||||| ||| | |||| ||| || |||| |||||| Sbjct 558 TTCACTCTTCTTATACATTTCCCAGATTTCAGGGTATTTAATAGGCAAAAGAACAAA 614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593663905103520