Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_001884.1 Length=134416 Score E Sequences producing significant alignments: (Bits) Value seq6136 102 7e-17 >seq6136 Length=575 Score = 102 bits (112), Expect = 7e-17 Identities = 191/279 (68%), Gaps = 5/279 (2%) Strand=Plus/Minus Query 120851 AATTGGATCAAGCTCAATAATGAAATCATGATCCAGAAAGATGGGAAGTATCAATTTGAA 120910 || |||||| |||||||||||| ||||||||| | || || | ||| | | ||||| Sbjct 477 AAATGGATCCTGCTCAATAATGAGATCATGATCAAAAAGGACGACGAGTTTAACCTTGAA 418 Query 120911 AAGGATAAGGAGGCCGTACATAGTTACTTTGTTGATTACATAAATCAAAACACAGTCTTT 120970 || || |||||||||||| |||||| | ||||| | ||| |||| || || || Sbjct 417 AAAGACAAGGAGGCCGTAAGGTCATACTTTCTGGATTATGTCAATAAAAATACCGTTTTC 358 Query 120971 TTCCATGATCTGAAAGAGAAGCTGGACTATCTGATTAAAAATGATTATTACGAGGAAGAA 121030 || | |||||||| || | ||||| |||||| |||| |||| ||| | || Sbjct 357 TTTTACACCCTGAAAGAAAAAATAGACTACCTGATTGAAAACAATTACTAC----ATCAA 302 Query 121031 TTCTTAAG-CAAATATACATTCGAACAGATTAAATCAATCTATAAGATTGCTTACAGTTA 121089 || ||||| | ||| | || ||| || | || | ||| | ||| || | Sbjct 301 TTTTTAAGAGCAGTATTCCTTTGAAGAGCTCCAAAGGGTATATGATTTTGTGTATTCCAA 242 Query 121090 CAAATTCAGATTCCCTTCTTTTATGAGTGCCTTTAAGTT 121128 |||||| | || | ||||| ||||||||||||||||| Sbjct 241 AAAATTCCGCTTTCAGTCTTTCATGAGTGCCTTTAAGTT 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429965658774878