Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_003315.1 Length=31508 Score E Sequences producing significant alignments: (Bits) Value seq2234 96.9 7e-16 seq1686 96.9 7e-16 >seq2234 Length=2923 Score = 96.9 bits (106), Expect = 7e-16 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 |||||||||||| |||||||||||| ||||||| | ||||||| | |||||||||| Sbjct 159 TGGTGGGTCGTGTGGGATTCGAACCTACGACCAATTGGTTAAAAGCCAACTGCTCTACCA 100 Query 418 ACTGAGCTAACGACCCAATTA 438 |||||||||||||||||| || Sbjct 99 ACTGAGCTAACGACCCAAATA 79 >seq1686 Length=12041 Score = 96.9 bits (106), Expect = 7e-16 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 |||||||||||| |||||||||||| ||||||| | ||||||| | |||||||||| Sbjct 10879 TGGTGGGTCGTGTGGGATTCGAACCTACGACCAATTGGTTAAAAGCCAACTGCTCTACCA 10820 Query 418 ACTGAGCTAACGACCCAATTA 438 |||||||||||||||||| || Sbjct 10819 ACTGAGCTAACGACCCAAATA 10799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100694703384360