Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq386 100 2e-16 >seq386 Length=121086 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20952 TGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCGATC 21011 || || || |||| ||||| || || || ||||| ||| |||||||| || || | | Sbjct 3195 TGCGCATCGCCCAGCGTGTGAACGAAATCACCCGGCTGCAGACCCGTGACCTGCGCCACC 3254 Query 21012 AGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCG 21071 | ||||| ||||| ||| ||||| || ||||| || ||||| || |||||| Sbjct 3255 ATGAGGGTCAGCAGGGCATAGGATGCGATATTGAACGGCACGCCGAGAAAGATATCGGCG 3314 Query 21072 GACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACACAAAACG 21131 || | |||||| ||||||||||| |||| || |||||||| ||||| ||| | Sbjct 3315 GAGCGCTGGTAGAGCTGGCAGGAAAGCTTTCCGTCGGCCACGTAGAACTGGAACAGGCAG 3374 Query 21132 TGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCG 21179 || || || || || ||||| ||| | ||| || ||||| ||| Sbjct 3375 TGGCAGGGCGGCAGCGCCATTTCATCGACGAGCGCCGGATTCCATGCG 3422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427735470095520