Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_005178.1 Length=37611 Score E Sequences producing significant alignments: (Bits) Value seq4983 329 8e-86 seq3974 248 2e-61 seq2008 154 4e-33 seq7019 131 4e-26 seq3067 125 2e-24 seq7244 93.3 1e-14 >seq4983 Length=2572 Score = 329 bits (364), Expect = 8e-86 Identities = 623/902 (69%), Gaps = 31/902 (3%) Strand=Plus/Plus Query 21361 GCGGCATTCGTCGCGATCAAAACCATCTTCAACAACGCCTTCGCGGCGGCCCCCACCACC 21420 || || ||||| || | |||||| | ||||| |||||||| | | | || |||| | | Sbjct 64 GCAGCTTTCGTTGCTCTGAAAACCCTTTTCAATAACGCCTTTGGGTCTGCACCCAGCTCT 123 Query 21421 TGGCAGAAGATCGCCATGGAAGTGCCGAGCAACACCAGCAGCAACGATTACAAGTGGTTG 21480 ||| | |||||||||||| | ||||| |||| ||| |||||||| || ||| || Sbjct 124 TGGGAAAAGATCGCCATGAAGGTGCCAAGCACCACTGGCAGCAACATGTATGCCTGGCTG 183 Query 21481 AGCACCTTTCCGAAGATGCGCCGCTGGATCGGCGCGAAGGTGGTCAAGAACCTGAAAGCC 21540 | ||||||||||||||||| ||| | || ||||| || |||||||| ||||| Sbjct 184 TCGGCGTTTCCGAAGATGCGCCGTTGGGTTGGTGCGAAACACGTTAAGAACCTCAAAGCG 243 Query 21541 TACAAGTACGTTGTCGAGAACGAGGACTTCGAGGCCACCGTCGAGGTGGACCGCAACGAC 21600 | || ||| || || ||||| ||||| || || || ||||| || ||||| ||| || Sbjct 244 TTCAGCTACACCGTGGAAAACGAAGACTTTGAAGCGACTGTCGAAGTAGACCGTAACCAC 303 Query 21601 ATCGAGGACGACCAAATCGGCATCTACTCGCCCCAGGCGAAGATGGCCGGTTACTCGGCG 21660 ||||| ||||| || | ||||| || ||||||||||| ||||||| || | ||||| Sbjct 304 ATCGAAGACGATCAGTTGGGCATTTATGCGCCCCAGGCGCAGATGGCTGGCTTTTCGGCA 363 Query 21661 GCTCAGCTCCCGGACGAGCTGGTCTATGAAGCGGTCAACGGCGCCTTCACCAAGCCCTGT 21720 | | | ||||| || | || | || ||| ||||| | ||| ||| | || Sbjct 364 AAGCGGTTGCCGGATGAAATCGTATTCGAGCTGGTGAACGGTGGCTTTGGCAACCTGTGC 423 Query 21721 TTCGACGGCCAGTATTTCATCGACACGGATCACCCTGTCGGTGATGCCTCGGTGAGCAAC 21780 | |||||| ||||||||| | || || || || |||||| || | || |||||| Sbjct 424 TACGACGGTCAGTATTTCTTTGATACAGACCATGTCGTCGGTAGTGGCAGCGTCAGCAAC 483 Query 21781 AAGGGCACCGCTCCGCTTTCCAACGCCAGCCAGGCGGCGGCGAAGGCAGGTTATGGCGCT 21840 || ||||| || | || |||| | | | |||||| || || ||||| |||||||||| Sbjct 484 AAAGGCACTGCGGCACTCTCCATCACGACCCAGGCAGCAGCCAAGGCCAGTTATGGCGCG 543 Query 21841 GCTCGCACTGCGATGAAGAAGTTCAAAGACGAGGAAGGACGTTCCCTCAACGTCTCCCCC 21900 || || || || ||| |||||||| ||||| || || || | || | || | || Sbjct 544 GCACGTACCGCCATGGGCAAGTTCAAGGACGATGACGGCCGCCCGCTGGATGT-GCGTCC 602 Query 21901 AAC-GTGCTCCTGGTCGGCCCGGCGCTGGAAGACGTGGCGAAGATGCTGCTCACCAACCC 21959 ||| | ||||||||||| || | ||||||||| || | || || ||| Sbjct 603 AACAATCCTCCTGGTCGGGCCTGGCCTGGAAGACACCGC----ACGCGCCTTGTTGACCA 658 Query 21960 GAAGCTCGC--GGACAACACCCCG---AACCCCTACGTCGGCACTGCTGAGCTGGTAG-- 22012 | | |||| ||| || | | |||| |||| ||||| || |||||||| | Sbjct 659 G-TGATCGCCTGGAAGACGGCAAGGTCAACCTCTACAAGGGCACCGCCGAGCTGGTTGTC 717 Query 22013 TGGACGGGCGTATCGAGTCCGACACCGCCTGGTTCCTGCTGGACACCACCAAGCCGGTAA 22072 | ||| || ||| |||||||| |||||||| || |||||||||| |||||| || Sbjct 718 TCGAC--TCGCATCACTTCCGACACGGCCTGGTTTCTTCTGGACACCAGCAAGCCCGTGC 775 Query 22073 AACCGTTCATCT-TC--CAGCCCAGGAAGCAGCCGGAATTCGTTTCCCAGGTCAACCTGG 22129 || ||||||| || ||| || |||| |||| ||||| ||| | ||| | Sbjct 776 GCCCCTTCATCTATCAGGAGCGCA--AAGC-CCCGGTCTTCGTCCAGCAGACCGACCCCG 832 Query 22130 ATTCGGATGACGTCTTCAACCTGCGCAAG---CTGAAGTTCGGCGCCGAAGCCCGCGCTG 22186 | | ||||| ||||||| | |||||| | |||||||| || ||||| || || | Sbjct 833 AAGCTGATGATGTCTTCAGC---CGCAAGAAATTCAAGTTCGGGGCAGAAGCGCGAGCGG 889 Query 22187 CTGCCGGTTACGGCTTCTGGCAGCTGGCCTATGGCTCCACCGGCACTGGCGCATAAGGGG 22246 ||| ||||| || |||||||| ||||| | ||||| || ||| | || ||||||| Sbjct 890 CTGGTGGTTATGGTTTCTGGCAACTGGCTTTCGGCTCGACTGGC---GAAGCGTAAGGGG 946 Query 22247 GC 22248 || Sbjct 947 GC 948 >seq3974 Length=4040 Score = 248 bits (274), Expect = 2e-61 Identities = 272/362 (75%), Gaps = 0/362 (0%) Strand=Plus/Minus Query 1403 AAAGACGATCGAACGCTGGACATCTTCGATGTTCCGCAGCCGGCCCGCGCTATACCTGGT 1462 || || ||||| ||| | ||||||||| ||| || ||||| | | ||||| || || Sbjct 2516 AAGGATGATCGTACGTTAGACATCTTCTCTGTCCCACAGCCAGTTCTGGCTATCCCAGGG 2457 Query 1463 GAGTGCAACTACGCCGCCCAGGTCAGCGAACTGGTCAGTGAAATTCTGAAGGCTTGCGAC 1522 | ||||| | ||||| |||||||| |||||| |||| || |||||||| | || ||| Sbjct 2456 AATGGCAACAATGCCGCACAGGTCAGTGAACTGATCAGCGAGATTCTGAAAGGTTCCGAT 2397 Query 1523 CTTGACCGTTACGAGGTCGCCGCCCGCATGTCGCGCCTGTCCGGCGATGACGTGAGCAAG 1582 || ||||||||||| | | || |||||||| ||| |||| |||||||||||||| ||| Sbjct 2396 CTGGACCGTTACGAAATTGGTGCACGCATGTCTCGCTTGTCTGGCGATGACGTGAGTAAG 2337 Query 1583 AACATGCTCGACGCCTGGTCGAGTCCCGCCCGAGCTGATCACAACTTGCCTTTCTACCGA 1642 ||||||| ||||| |||||||| || |||||| | || || ||| |||| ||||| || Sbjct 2336 CACATGCTTGACGCGTGGTCGAGCCCAGCCCGAACAGACCATAACCTGCCGTTCTATAGA 2277 Query 1643 GCCGCCCTCCTAGAGGACGTCTGCGCGAGCCATCTGCTGACCAACTGGCTGGTCGATGTG 1702 ||| | || || || || || || || || | | ||| |||||||||| || Sbjct 2276 GCCCCACTGCTTGAAGAAGTTTGTAGCAGTCACGTTTTAACCGACTGGCTGGTTGAGCAA 2217 Query 1703 CGTGGCGGCCGCGTGGCTTACGGCCGCGATGCACTGCTCGCCGAACTGGGCCGCCTTGAG 1762 ||||| ||||||||||||||||| ||||||||||| ||| || || || || || | | Sbjct 2216 CGTGGTGGCCGCGTGGCTTACGGTCGCGATGCACTCAACGCGGAGCTTGGTCGTCTGGCG 2157 Query 1763 CG 1764 || Sbjct 2156 CG 2155 Score = 141 bits (156), Expect = 2e-29 Identities = 281/416 (68%), Gaps = 0/416 (0%) Strand=Plus/Minus Query 180 ATCCAGCGGCTAGCCCATACAACCCTTCCGATGATCTCCAGGTCCGACAGCTTTGCCTTT 239 ||||| | || ||||||||| || | || || ||||||||||| || ||| || | Sbjct 3763 ATCCAACCGCCAGCCCATACTACGCGGCCAATTATCTCCAGGTCGTTCAACTTATCCCTG 3704 Query 240 GGGACAATCATTTCGGTATAGGCCTTGTTTTCGCTGATGATCGACACCGACCCGTCAAAG 299 ||||||| ||| ||| ||||||||||| || |||||||| | |||||||| || Sbjct 3703 GGGACAACCATATCGCGGTAGGCCTTGTTCTCACTGATGATGTGAATAGACCCGTCGAAC 3644 Query 300 CGCCTTTGCAGGCGCTTTGCATAGAGATGGTCATCCAGGCGAACGACGTAGACTGCCGCG 359 ||| || || | || |||||||||||||||||||| || | |||||| || ||| | Sbjct 3643 TGCCGCTGGAGCCTTTTCGCATAGAGATGGTCATCCAGCCGGATGACGTATACAGCCTCT 3584 Query 360 TCTTGGACCGTTGACTTGGTGTGATCCACAAGCACTGTATCGCCATCGCACAGCAGAGGC 419 | | | || | |||| || | | ||| ||||||||||||| || || | Sbjct 3583 CCCTCAAGCGAGCTGCGGCTGTGGTCAATCATCACAGTATCGCCATCGCTTAGAAGTCCC 3524 Query 420 TCCATAGAGTCACCGCCAATGCGGATCGCTGAGATACTGGAGGGGTCCAAGCCCTTTTTT 479 ||||| || || ||| | | ||||| || || | | | | ||||| ||| | || Sbjct 3523 TCCATCGAATCCCCGTCCACTCGGATTGCGGACAGTCGCGCAGAGTCCAGGCCTTGCTTG 3464 Query 480 CGCAGGCTGTACCGGGTGAATGCCAGATTCACAAGCACGGTGGCGCCGTCGGTCCAGGAA 539 || || |||| |||||| || || | || || || || || ||| |||||| Sbjct 3463 CGAAGCGAGTACGCGGTGAACGCAAGCTGGGTTAGGACAGTAGCCCCTTCGCTCCAGGCG 3404 Query 540 CCGTGCCCTGCGCTCACCTGGCCGTCATAGAGGGGTATGTATACATACTCGCCCTC 595 ||||| || || || ||| |||| || | || | ||| | |||| | |||| Sbjct 3403 CCGTGTCCCGCACTACAGTGGGCGTCGTACAAAGGCACGTAAGCGTACTTGTCCTC 3348 >seq2008 Length=9006 Score = 154 bits (170), Expect = 4e-33 Identities = 133/162 (82%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 26466 CGATGCAGGAAGCGACCGGCAAGGCTGTTTCGGATACGGTCGCCGAGTTCTCCAAGCTGG 26525 ||||||||||||| |||||||||||||| || || |||||||||||||||||||||| Sbjct 711 CGATGCAGGAAGCCACCGGCAAGGCTGTGAGCGAGACTGTCGCCGAGTTCTCCAAGCTGG 770 Query 26526 CCGACGAACCGGTCAAAGCCTC-GCAGCAACTCAACGAGAAATATCACTACCTGACCGCC 26584 | ||||| ||||| || ||||| || || || |||||| | || ||||| ||||| || Sbjct 771 CAGACGACCCGGTAAAGGCCTCTGCTGC-GCTGAACGAGCAGTACCACTATCTGACGGCT 829 Query 26585 TCGGTTTACGAGCAGATAGCCGCCCTCGATCAGCAAGGCGAT 26626 ||||||||| |||||| ||||| || || ||||| |||||| Sbjct 830 TCGGTTTACTCGCAGATTGCCGCACTGGAGCAGCAGGGCGAT 871 Score = 123 bits (136), Expect = 6e-24 Identities = 466/721 (65%), Gaps = 20/721 (3%) Strand=Plus/Plus Query 27412 GACCAGGTCACCGCAGCCTATGAGGGGGAAATCCAGGCGCTGGAGGCGCTGCGCGACAAA 27471 ||| |||| |||||||||||||||| || || ||||||||||| | | ||| Sbjct 1592 GACGAGGTGACCGCAGCCTATGAGGCCGAGATTGCCGCGCTGGAGGCCGTCAAAGGCAAG 1651 Query 27472 AGTTCCACCACGGCGGCCCAGCGCATCAGCCTGGACCAGAAGATCGCCGAGGCCAGGAAC 27531 | ||||| || || |||||| ||||| |||||||||||||||| || || | Sbjct 1652 AAGTCCACGACTGCTGCCCAGAGCATCCAGTTGGACCAGAAGATCGCTGACGCGCGCGCA 1711 Query 27532 AACATGGTCAAGGCGCAGAAGAAGGCCGACGCCGACCTGGAAGTCCT--CCAGCTCAACG 27589 ||||||||||||||||| |||||||| | | || || || | ||| ||||| Sbjct 1712 GGGATGGTCAAGGCGCAGAAAGAGGCCGACAACCAGCTTGAGGTGTTGGCCA--CCAACG 1769 Query 27590 AACAGGGCCGCCTGAAGAAACAGGCCCAGGCAGTCAAGGCCTACAGCGACGCGCTCCAGC 27649 | || |||||| || |||| | | || ||| ||||| | || || | Sbjct 1770 AGACCGGACGCCTGGCCAAGCAGGAACGGTCAATCACCACCTACGTGCAGGCCCTGGCTC 1829 Query 27650 AACAACAGGATGCGCTGGCCCTCCAGGGTCAACGTGCCGCCGCTGCCGTGGGCATGGGCG 27709 | |||||| || |||| || || ||||| || | || ||||||| ||| | Sbjct 1830 AGCAACAGCGAGCCCTGGAACTTGCCGGCCAACGCGCAGTACTTGGCGTGGGCCAGGGGG 1889 Query 27710 --CGCAACAGCGC-CGCTTGTTCGATCAGCGTGGCAGCCTTGACGACCGATTCGCGCAGC 27766 ||| | | ||| | | ||| | | ||||| | ||||| || || |||| Sbjct 1890 ACCGCCAGAACGCACTCAACGGCGAACTG---AACAGCCAGCAAGACCGGTTTGCTCAGC 1946 Query 27767 AGCGCCTGGACCTGGCGAGCCAGTACGGTGACGGCTCGCGAGGCATGAGCCTCGACGAGT 27826 || ||||| |||| | |||| | ||| ||||| |||| || |||| Sbjct 1947 AGTCGCTGGAGTTGGCCAACCAGAAATCCGACCCGTCGCGCAACATGTCGGAGGAGGAGT 2006 Query 27827 ACAA-CGACAAGCTCAAGGCGCT---GGAAGCTAACCATGCCGCGA-TGACCCAGCAGCT 27881 ||| ||| || | | ||||||| || || ||| | ||||| | |||| ||| | Sbjct 2007 TCAAGCGAAAATC-CCAGGCGCTTGCAGATGCGAACAAGGCCGCCACTGAC----CAGAT 2061 Query 27882 GCAACGCAACTACGCCGACCTCCAGGCCGCCCAGGGCAACTGGGTCAACGGGGCGACGTC 27941 | | ||||| || || | || ||| |||||| ||||| || || |||||||| Sbjct 2062 CCGGCAGAACTATGCGGATGTGGAGAACGCACAGGGCGACTGGACGAAGGGCGCGACGTC 2121 Query 27942 GGCGTTCGCTGACTACATCGACTCCGCCAGGGACGTCGCGGGCCAGACCTACGAACTGTT 28001 ||| | || ||||| | || || || | | || | || ||||||||| | ||||| Sbjct 2122 GGCCTGGGCCAACTACCTGGATTCGGCGAAGAACATTGCCGGCCAGACCAAAAGCCTGTT 2181 Query 28002 TAGTAACGCCTTCTCCGGTCTGGAGGATGCCGTCGTTACCTTTGTGACGACTGGCAAGGC 28061 | || |||||| | | ||||||| || || || | ||| | | ||| |||||||| Sbjct 2182 CGGCAATGCCTTCAGCAGCATGGAGGACGCGGTAGTCAACTTCGCAATGACCGGCAAGGC 2241 Query 28062 CTCGCTGGATGACTTCGTCCGCACCATGATTGGCGACCTGGCCAGGATGGCGACCCGCCA 28121 ||| | ||||||| | || ||| ||| ||||| | || || |||||||| Sbjct 2242 ATCGTTCTCGGACTTCGCTAAATCGATCCTTGCAGACATGGCCCGCATTGCTACCCGCCA 2301 Query 28122 G 28122 | Sbjct 2302 G 2302 >seq7019 Length=625 Score = 131 bits (144), Expect = 4e-26 Identities = 262/386 (68%), Gaps = 8/386 (2%) Strand=Plus/Minus Query 20926 GACCGCAACACCCCGCTCCAGGACGCCGAGGTCATCGGCGTGCCGGTAGCGGCCAACGTC 20985 || ||||| || || | ||||| ||||||| | | || || || || || |||||| Sbjct 395 GATCGCAATACGCCAATGAAGGACACCGAGGTGCTGGTGGTTCCTGTCGCCGCTAACGTC 336 Query 20986 CAGGTCTTCGCCGGCGCCATCGTCGTGGCGAACGCTACCGGGTTCGCCGTGGGCGGCAGC 21045 | ||||||| ||| || | | || || | ||| || || || || | ||| Sbjct 335 CGCATCTTCGCGGGCTCCCTGGCGGTTGCCACCGCCACTGGCTTTGCTGCACCCGGTTCA 276 Query 21046 ACCGCCACCGGCCTGACCTACCTGGGCCGCGCTGAGGAATACGTGGACAACCGCAATGGC 21105 |||||| ||| || ||||||||||||| |||| || || |||||||| ||| Sbjct 275 ACCGCCCTGGGCTTGTCCTACCTGGGCCGTTTCGAGGCATCAGTCGACAACCGAGGGGGC 216 Query 21106 GCGGATGGCGC---CAAGGTCGTCCGTG-TGCGCCGCCTGAACGCCTTCAAGTGGGCGAA 21161 || | ||| || | ||| ||| | | |||| || || ||| ||||| || Sbjct 215 GCCGCTGGTGCTGCCCAGG----CCGAGATCCGCCATGGCAAGGCATTCCTTTGGGCCAA 160 Query 21162 CGACGGCAGCGTCACCCAGGCGCACCTGATGAAACCCGCCTACATCGTGGACGACCAGAC 21221 ||||| | | |||| |||||||||||| | || || ||||||||||| || ||| | || Sbjct 159 TGACGGAACCATCACTCAGGCGCACCTGTTCAAGCCAGCCTACATCGTTGATGACGAAAC 100 Query 21222 CGTCGCCGCCACGGACGGCACCGAAACCCGCTCCCCGGCCGGCCGCATCATCGGCGTCGA 21281 |||||| || | || | || ||||| ||| | ||||| |||||| |||| | || Sbjct 99 CGTCGCGGCTGCTGATGCAGGCGGCACCCGATCCGCTGCCGGACGCATCGTCGGTATTGA 40 Query 21282 ACCGGACGGCGTGTGGGTGGAATAAC 21307 | ||||||| ||||| || |||| Sbjct 39 TACCAACGGCGTTTGGGTTGAGTAAC 14 >seq3067 Length=6736 Score = 125 bits (138), Expect = 2e-24 Identities = 135/175 (77%), Gaps = 8/175 (5%) Strand=Plus/Minus Query 9414 ACGGCCAAGAACCGCA--CCGTCCACTGAGCGAAACCGCCCCGGCCTAGCCGGGACGGTC 9471 ||||||| |||| | || | || | ||||||| ||||||||| || ||| ||||| Sbjct 2353 ACGGCCAGGAACAACTTGCCCTGCATTAAGCGAAATCGCCCCGGCGC-GCTGGGGCGGTC 2295 Query 9472 TGCCGGACGTGGTGGTCCGGTACTGATGAGCAGCCACCCATGACGAACGA---ACCAAGA 9528 ||||||||||||| |||||||||||||||||||||||||||||| |||| ||| | | Sbjct 2294 TGCCGGACGTGGTTGTCCGGTACTGATGAGCAGCCACCCATGACAGACGAAACACCCAAA 2235 Query 9529 CAGACCGCCAGCGCCGCCTGGCGCGGGAACGCCAACGAGCGAAGCGCGAGCGCGA 9583 ||| ||| | ||||||||| | || || |||| || ||||| ||||||| Sbjct 2234 CAG--CGCAAAACCCGCCTGGCATGCGAGCGTAAACGTGCCCAGCGCAAGCGCGA 2182 Score = 114 bits (126), Expect = 3e-21 Identities = 218/321 (68%), Gaps = 9/321 (3%) Strand=Plus/Minus Query 9830 AAAATCCACATCGCCAAGGCCCAGCTGGGCATGGACGATGACACCTATCGCGCATTGCTC 9889 || ||||||||||||||| | || || |||| || || ||||| || || ||| | Sbjct 1953 AAGATCCACATCGCCAAGAAGGACCTTGGGCTGGATGACGAAACCTACCGGGCCTTGTTG 1894 Query 9890 GCTCGCGTCGCGGGCGTGCGCTCGGCCAAGGACTTAGGGCCGCGCCAGATTGACCAGGTA 9949 | ||||| ||||| ||||| |||||||| ||| | ||| |||||||| | | ||| Sbjct 1893 GGCCGCGTGGCGGGTGTGCGTTCGGCCAAAGACCTGACGCCACGCCAGATCGGCGCTGTA 1834 Query 9950 CTGGTGGAACTCCAGCGTCTGGGCTGG------AAACCGAAGAGCAACCGGCAAGGCCGG 10003 |||| || | || |||||||| ||||||| | || ||||||||| Sbjct 1833 CTGGCCGAGTTTGCCCGCTTGGGCTGGGAGTCTAAACCGACTAAAAA---GCAAGGCCGC 1777 Query 10004 GCGACGCCAAAAGTGCCGCAAAACCGGCAAACCGTGCTGCGCAAAATCACCGCGCTCCTG 10063 | || | | | ||| | ||||| || || || | ||||| || | || Sbjct 1776 AAGGGACCGATGGCGGCGCCAGACCGGGTAAAGCTGGTGGGTAAAATAGAGGCTTTTCTC 1717 Query 10064 GCCAGCGCCCATCGCCCCTGGAGCTACGCCGACCATATGGCCCGGCGCATGTTCCAGGTC 10123 ||| ||| | ||| ||||| || |||||| |||||||| |||||||||| ||||| Sbjct 1716 GCCGAGGCCAAACGCTCCTGGGCATATGCCGACGGTATGGCCCTGCGCATGTTCAAGGTC 1657 Query 10124 GAGCGGGTCGAGTGGCTGGAC 10144 ||||| || || ||||| ||| Sbjct 1656 GAGCGAGTGGAATGGCTAGAC 1636 Score = 96.9 bits (106), Expect = 8e-16 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 6887 GCCTGGGGCGAGCGTCCGCCCGTCTTCGTCCAGCTGCTCGCCGCTGAGGTGGCCCGCAGC 6946 || |||||| || |||| | ||||| | ||||||||||| || || || || | Sbjct 5466 GCTTGGGGCCAGGACGCGCCGTTGTTCGTACGCCTGCTCGCCGCCGAAGTCGCTGCCACC 5407 Query 6947 AGCCAGACGAAAGCCGGCGAGGCAATCGGCATGAGCCGTTCGACCGTCAGCACCATCCTC 7006 | | |||| || ||| || || |||||||||||||| || |||||||| | ||| Sbjct 5406 AACAAGACCAAGGCCAGCCAGCGTATCGGCATGAGCCGCACGGCCGTCAGCCTGACCCTT 5347 Query 7007 GCCAACCGCTACCCGTCGCCCTCGACGATCCGCGTCGAGCGTCGTGTCCTGGCCGCGCTG 7066 |||||||||| |||||||| | | | || ||||| || || ||| | ||| Sbjct 5346 TCCAACCGCTATGCGTCGCCCAGCATGGCGGGTGTTGAGCGGCGGGTAATGGAAACCCTG 5287 Query 7067 AGCCGCATTGAGTGCCCGGCCCTGGGCGAGGCGGTGACCTCGGTCGAGTGC 7117 | |||||||| || ||||||| |||| | || ||| ||| | ||||| Sbjct 5286 GGGCGCATTGAATGTGTCGCCCTGGACGAGACCGTTACCACGGACCAGTGC 5236 Score = 96.9 bits (106), Expect = 8e-16 Identities = 265/399 (66%), Gaps = 14/399 (4%) Strand=Plus/Minus Query 4878 ATCCTGGGTGAAATGGGCATCAAGCCGGCCGGGACCATCCCGGAAATGGCCGACCAGATC 4937 ||||| | || ||| ||||| | |||||| |||||| ||| |||| |||||||||| Sbjct 6602 ATCCTTCGCGAGATGAGCATCCAACCGGCCCCGACCATGTCGGTGATGGTCGACCAGATC 6543 Query 4938 GCCGAGGAACTGGCCGCCAGCGGCCGCCCGCTGATCATCGACGAAATGGACCACCTGGTC 4997 || ||| | || || ||||| ||||||||| | |||||||| || | ||||| || Sbjct 6542 GCTGAGCAGTTGTCCAAGAGCGGGCGCCCGCTGTTGATCGACGACGTGCAATACCTGCTC 6483 Query 4998 ------GCCGCTGGCCAGGTCGAGCTGATTCGTGATCTGTACGAGTCCAGCCAAGCCTCC 5051 |||| | |||| || |||| || ||| ||| | ||||| ||| || Sbjct 6482 GAAAAAGCCG-TAGCCA--ACGTCCTGA-CCGACATC--TACAACGCCAGCGAAGGGACC 6429 Query 5052 ATCTTGCTGATCGGCGAGGAAATGCTGCCGACCAAGCTGAAGAAGTTCGAACGCTTCCAT 5111 || | ||||||||||| ||| |||| | ||| |||| | |||||| | ||| Sbjct 6428 ATTGTCCTGATCGGCGAAGAACGTGTGCCCGGTAGCCTGGCGAAGCTGGAACGCCTGCAT 6369 Query 5112 GGCCGCGTGCTGAGCTGGGTTCCGGCCCAGCCAGTGTCTCTGGAGGACGCCCGCAACCTG 5171 ||| |||||| ||||| || || |||| | | ||||| || ||| |||| Sbjct 6368 AACCGGGTGCTGGAGTGGGTACCTGCGCAGCGCGCCACCCTGGACGATCTGCGCGCCCTG 6309 Query 5172 GCGCCGGTCTACAGCCCCGGAGTGGC-TATCGCTGACGATCTGCTCGCGCACCTGGTGAA 5230 || | ||| | |||||| | || ||||||| ||| |||| | ||||| || Sbjct 6308 GC-CGAGTCAAGCTACCCGGAATTGCACTTCGCTGATGATTTGCTGGATGACCTGCGCAA 6250 Query 5231 GAAGTCCCTGGGCTCTGTCCGTCGCGTCGCGGTTAACCT 5269 |||| |||| | ||||| || ||||| ||||| Sbjct 6249 GAAGGTGAATGGCTGCCTGCGTCGTGTAGCGGTCAACCT 6211 >seq7244 Length=602 Score = 93.3 bits (102), Expect = 1e-14 Identities = 159/226 (70%), Gaps = 11/226 (5%) Strand=Plus/Plus Query 11520 AACCTCGCGGCATCCGCAACAACAACCCCGGCAACATCGTTTGGTCGGCACG--CAACAA 11577 |||| ||||| | |||||| ||| ||||||||||||| || || | || |||| | Sbjct 382 AACC-CGCGGGGTGCGCAACCGCAATCCCGGCAACATCGATTA--CGTCCCGGCCAACCA 438 Query 11578 CTGGCAGGGCCAGCTCCCGCACAACCCGAAGATCGAGCCCCGATTCGCCCGCTTCGACAC 11637 ||||| ||||| || | ||||| || ||| || || ||||| || || || Sbjct 439 ATGGCAAGGCCAACTGAAACCAGACCCGGCTATAGAGAAACGCTTTGCCCGGTTTGATAC 498 Query 11638 CGCGCATAACGGCATCCGCGCCCTGGCAAAGCTGCTGCTGAACTAT---CGCAAGGTCGA 11694 || | ||||||||||| ||||||| ||||||||||||| |||| |||||| | Sbjct 499 GCCGGAAAACGGCATCCGTGCCCTGGGCAAGCTGCTGCTGACCTATCAGCGCAAG---CA 555 Query 11695 CGGCCTGCGCACCGTCGAATCGCTGATCGCTCGCTGGGCGCCGTCC 11740 ||| | ||||| | || | ||| |||||||||||||||| Sbjct 556 CGGGTTAAAGACCGTGAAGGCGATCATCAGTCGCTGGGCGCCGTCC 601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120222500484924