Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_005357.1 Length=42493 Score E Sequences producing significant alignments: (Bits) Value seq915 324 4e-84 >seq915 Length=38681 Score = 324 bits (358), Expect = 4e-84 Identities = 467/656 (71%), Gaps = 2/656 (0%) Strand=Plus/Minus Query 18968 AGTTCGGACACGTCCACATTGGCGATGCGGACGACGTAACGCCAGTCGCGCAGGGTCAGG 19027 || ||| ||| || | ||||||||||| || ||||| |||||||| ||||| | ||| Sbjct 18992 AGATCGCTCACATCGATGTTGGCGATGCGCACAACGTAGCGCCAGTCACGCAGTGCCAGA 18933 Query 19028 CCGATGTCCCACTTGTAGTGGGTGCGGTAGCCCTGGTAGCGGCCGCCGGCGGCGTCGATC 19087 ||| | ||||| ||||| ||||| || ||||||||||| || || ||| |||| | Sbjct 18932 CCGTTATCCCATTTGTAATGGGTACGATAGCCCTGGTATTTACCACCACTGGCATCGACC 18873 Query 19088 AGCGTGTCCTCGCCGAGGTCACGCGATTGCAGGCCGGCCTGCGAACCCTTCGGGTAGATG 19147 || || | ||| || |||| | | || ||||| || | | || |||||| ||||| Sbjct 18872 AGGGTTTGCTCACCAAGGTTCTGAGTCTGTAGGCCAGCTTTCTGCCCTTTCGGGAAGATG 18813 Query 19148 GTATGCAGGGTGTTCGGCCCCCACACCGTCAGCCAGATGGATGCGTTGTCGCTGCCCGTG 19207 ||| | |||||| ||||| ||| ||||||||| || | ||| || |||| || Sbjct 18812 CCATGAACGGTGTTTTCACCCCATACCACCAGCCAGATAGAGGTGTTATCAGTGCCGGTA 18753 Query 19208 CCGCCGGCGTCGATGATGTTCTGGCCGTTCTCCGCGGACAGGCTGTTGAAGCGCGGCGTC 19267 ||||| |||||||| |||||||||||||| | || ||| |||| | | || | | | Sbjct 18752 CCGCCAGCGTCGATAATGTTCTGGCCGTTACCTGCAGACTTGCTGGAGTAACGGGATGAC 18693 Query 19268 AGGCCCATGAACTTCTCGGCGTCGATGCTGGAATCGCCGTAGAACAGCGTGGTCGCCTGG 19327 ||||||||||| | || | || | |||| |||||||||||||||||| ||| Sbjct 18692 AGGCCCATGAATTGCTGTGGGTTCACACTGGTATCGCCGTAGAACAGCGTCTGAGCCATC 18633 Query 19328 GTCTGGTTCATGCCTTCGATGAAGGCGCGGTCTTCGGACAGGCGCCAGGCGGCGGAATTG 19387 ||||||||| ||||||||||| || |||||||| ||||| || | | || | |||| Sbjct 18632 TGCTGGTTCATACCTTCGATGAATGCACGGTCTTCCGACAGACGGAATTCAGCAGTATTG 18573 Query 19388 CCGTTGAGGTCGGCCAGGGCCTTGTCCACTTCGGCGTAGGTTTCCAGCATCCCCATGCTG 19447 ||||| || || ||||| | ||| || || || || ||||||||||||||||| | | Sbjct 18572 CCGTTCAGATCAGCCAGAGACTTATCAACCTCAGCATAGGTTTCCAGCATCCCGCAGGAG 18513 Query 19448 TCCTTGACCTGCACGGTGCGGGACTTCTCGGGCTGCACGCCATAGTTCAGCTTGCGCCAG 19507 || | ||||| |||||| || || |||||||| || ||||||||| |||||| Sbjct 18512 TCTGTAACCTGTACGGTGGTTGATTTGCTTGGCTGCACACCGTAGTTCAGCAAGCGCCAT 18453 Query 19508 GTGCCGGTGGGCAGGCCGCTGCGAACCGTGGTCTTGTGCTCGGTGAAACCGTTGGCCTCG 19567 || | | |||| || || || ||||| |||| | || |||| |||| Sbjct 18452 GTCGCAGATGGCAAACCAGATCGCACAGTGGTGCGGTGCCCTGTTGGCAGGTTGCCCTCT 18393 Query 19568 ATGACGGTCATGT-CGTCGAGGATTTCGTTGGTTTCGTTCAGCATTTCGACGATCT 19622 | || |||||| |||| ||||||||||| || | | || | |||||| |||| Sbjct 18392 ACGAACATCATGTCCGTC-AGGATTTCGTTTGTCTGGGAAAGGAGTTCGACAATCT 18338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135843458283540