Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq483 104 4e-18 >seq483 Length=71678 Score = 104 bits (114), Expect = 4e-18 Identities = 150/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 16464 ACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGC 16523 |||| | || || ||||||||||||||||||||||| |||||| | ||||| ||||| | Sbjct 57787 ACATTTACGGTATTACCAAGCCAGCTATCCGTCGTCTTGCTCGTAGAGGTGGTGTCAAAC 57846 Query 16524 GTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA-AGACC 16582 || |||| | ||||||| || | ||||| ||| || | | ||| || | | | Sbjct 57847 GTATCTCCTTACCAATCTATGATGAAACTCGTGGTGTCTT-ACGTACTTTCTTACAAAAT 57905 Query 16583 GTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATG 16642 || || | ||| || | || ||||| || || || ||| |||||||| ||||| Sbjct 57906 GTAATTCGTGACTCTGTAGCTTACACCGATCATGCCAATCGTCGTACTGTCACTGCCATG 57965 Query 16643 GATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| |||||||||| | ||| | ||||| Sbjct 57966 GATGTCGTCTATGCCCTCAAAAGACAAGG 57994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79068092177382