Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_006938.1 Length=63649 Score E Sequences producing significant alignments: (Bits) Value seq654 111 6e-20 >seq654 Length=148201 Score = 111 bits (122), Expect = 6e-20 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 7921 GTCGTTGACGAGTGTTCGATGGTCGACATGCAGGTCGGTCAAGACCTCCTCTCCTTCGAC 7980 ||||| |||||||| |||||||| ||| ||| |||| | || ||| | ||||| | Sbjct 11397 GTCGTCGACGAGTGCTCGATGGTGGACGAACAGCTCGGCCGCGATCTCATGAGCTTCGGC 11456 Query 7981 GTCCCCATCCTCGTGCTCGGCGACCCGGCCCAGCTCCCGCCCGTCATGGGAGGTGGCTTC 8040 |||||| || ||||| |||||||| | |||||| |||||| | || || |||||| Sbjct 11457 ACCCCCATTCTGGTGCTGGGCGACCCTGGCCAGCTGCCGCCCATATCCGGCGGCGGCTTC 11516 Query 8041 TTCACGGAGGCCAAGCCGGACATGATGCTGACGGACATCCACCGCCAGGCCAAGGACAAC 8100 ||||| || | ||||||| | |||| | || |||||||| ||||| |||||| Sbjct 11517 TTCACCGAACACGAGCCGGATTTCCTGCTCAGCGAAATCCACCGGCAGGCGCGCGACAAC 11576 Query 8101 CCCATCATCGAGATGGCGACCCGCGTCCGCGAGG 8134 || ||| | ||||| | ||| ||||||| Sbjct 11577 CCGATCCTGCGCCTGGCGCTCGACGTGCGCGAGG 11610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203532714338540