Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq982 156 4e-33 seq322 134 1e-26 seq540 131 2e-25 seq391 86.0 6e-12 >seq982 Length=41121 Score = 156 bits (172), Expect = 4e-33 Identities = 175/233 (75%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAA---TCA 26825 |||||| | ||||| || || || || || ||| | |||||| | || ||||| ||| Sbjct 2138 ATGCAAATTTTTGTCAAGACCTTGACCGGTAAAACTATCACCTTAGAGGTAGAAGGTTCA 2079 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 |||||||| || | ||||| ||||| ||||||||||| || || |||||| Sbjct 2078 ---GACACCATTGAAAACGTCAAGACCAAGATCCAAGACAAAGAAGGTATCCCACCCGAT 2022 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 ||||||||||| |||| || || |||||| | ||||||| | | | | || || || Sbjct 2021 CAACAAAGACTTATTTTCGCTGGTAAACAATTGGAAGATGGTCGTACCCTCTCTGATTAC 1962 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 ||||| ||||||||||||||| ||||| | ||||| ||||||||||| ||||| Sbjct 1961 AACATCCAAAAAGAATCTACTCTCCATTTAGTCCTCAGACTTAGAGGTGGAAA 1909 Score = 154 bits (170), Expect = 1e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || |||||| | |||||||| || || || || ||| | |||||| | ||| | ||| Sbjct 2825 AACATGCAAATTTTTGTAAAGACCTTGACCGGTAAAACAATCACCTTGGAAGTTGAAGGT 2766 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 |||||||| || | ||||| |||||| ||||||||||| || || || ||| Sbjct 2765 TCTGACACCATTGAAAATGTCAAGACCAAGATTCAAGACAAAGAAGGTATCCCACCTGAT 2706 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 ||||||||||| |||| || ||| |||||| | ||||||| | | | | |||||| Sbjct 2705 CAACAAAGACTTATTTTCGCCGGTAAACAATTAGAAGATGGTCGTACTTTATCCGACTAC 2646 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||||||||||| ||| ||||| | ||||| ||||||||||| || Sbjct 2645 AACATCCAAAAAGAATCAACTCTCCATTTAGTCCTCAGACTTAGAGGTGG 2596 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || || || || ||| | |||||| | ||| | ||| Sbjct 2594 ATGCAAATTTTTGTCAAGACCTTGACCGGTAAAACTATCACCTTGGAAGTTGAAGGTTCT 2535 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | ||||| ||||| ||||||||||| || || ||||||||| Sbjct 2534 GACACCATTGAAAATGTCAAGACCAAGATCCAAGACAAAGAAGGTATCCCACCCGATCAA 2475 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||||| |||| || || |||||| | ||||||| | | | | |||||| ||| Sbjct 2474 CAAAGACTTATTTTCGCTGGTAAACAATTGGAAGATGGTCGTACTTTATCCGACTACAAC 2415 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACT 26986 |||||||| ||||| || ||||| |||| || ||||| Sbjct 2414 ATTCAAAAGGAATCAACCCTCCATTTGGTACTTAGACT 2377 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | |||||||| || || || || ||| | |||||| | ||| | ||| Sbjct 2366 ATGCAAATCTTTGTAAAGACCTTGACCGGTAAAACAATCACCTTGGAAGTCGAAGGTTCT 2307 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| ||||| ||||||||||| || || ||||| ||| Sbjct 2306 GACACCATCGAAAACGTCAAGACCAAGATCCAAGACAAAGAAGGTATCCCACCCGACCAA 2247 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||||| || | | ||| |||||| | ||||||| | | | | |||||| ||| Sbjct 2246 CAAAGACTTATCTTTGCCGGTAAACAATTGGAAGATGGTCGTACTTTATCCGACTACAAC 2187 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||| ||||| || ||||| |||| || ||| | ||||| || Sbjct 2186 ATCCAAAAGGAATCAACCCTCCATTTGGTACTTAGATTAAGAGGTGG 2140 >seq322 Length=112280 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | |||||||| || || || || ||| | || ||| | ||| | ||| Sbjct 11461 ATGCAAATCTTTGTAAAGACCTTGACCGGTAAAACTATTACCTTAGAAGTTGAAGGTTCT 11520 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| ||| | || || ||||| ||||||||||| || || ||||| ||| Sbjct 11521 GATACCATTGAGAATGTAAAGACCAAGATCCAAGACAAAGAAGGTATCCCACCCGACCAA 11580 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||||||||||||| | || |||||| | ||||| | | | | | || ||||| ||| Sbjct 11581 CAAAGACTCATTTTTGCTGGTAAACAATTAGAAGACGGTCGTACCCTCTCTGACTACAAC 11640 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||||||||||||| ||||| | || || ||||||||||| || Sbjct 11641 ATCCAAAAAGAATCTACTCTCCATTTAGTTCTCAGACTTAGAGGTGG 11687 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | |||||||| || || || || ||| | |||||| | ||| ||||| Sbjct 11689 ATGCAAATCTTTGTAAAGACCTTGACCGGTAAAACAATCACCTTGGAAGTAGAAGGTTCT 11748 Query 26829 GACACCATCGAGCAAGTCAA-ACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || ||||| || | ||||| || ||| || ||||||||||| || || |||||||| Sbjct 11749 GATACCATTGAAAACGTCAAGACCAAA-ATCCAAGACAAAGAAGGTATCCCACCCGATCA 11807 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 |||||||||||||| | || |||||| | ||||||| | | | || ||||| || Sbjct 11808 ACAAAGACTCATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTACAA 11867 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||| ||||||||||| || ||||| |||| || ||| | ||||| || Sbjct 11868 CATCCAAAAAGAATCAACACTCCATTTGGTACTTAGATTAAGAGGTGG 11915 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || || || || ||| | || ||| | ||| | ||| Sbjct 11917 ATGCAAATTTTTGTCAAGACCTTGACCGGTAAAACTATTACCTTAGAAGTTGAAGGCTCT 11976 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | ||||| ||||| || || ||||| || || ||||||||| Sbjct 11977 GACACCATTGAAAATGTCAAGACCAAGATCCAAGATAAGGAAGGTATCCCACCCGATCAA 12036 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||||| |||| | || || ||| | ||||||| | | | | || ||||| ||| Sbjct 12037 CAAAGACTTATTTTTGCTGGTAAGCAATTGGAAGATGGTCGTACCCTCTCTGACTACAAC 12096 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 || ||||||||||| ||| ||||| | ||||| ||||||||||| ||||| Sbjct 12097 ATCCAAAAAGAATCAACTCTCCATTTAGTCCTCAGACTTAGAGGTGGAAA 12146 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || || || || ||| | || ||| | ||| | ||| Sbjct 11233 ATGCAAATTTTTGTCAAGACCTTGACCGGTAAAACTATTACCTTAGAAGTTGAAGGTTCT 11292 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || ||| || || ||||||||||| || || ||||||||| Sbjct 11293 GACACCATCGAAAACGTTAAAACCAAAATCCAAGACAAAGAAGGTATCCCACCCGATCAA 11352 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||||| |||| | || |||||| | ||||||| | | | | |||||| ||| Sbjct 11353 CAAAGACTTATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACTTTATCCGACTACAAC 11412 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACT 26986 || ||||||||||| ||| ||||| | ||||| ||||| Sbjct 11413 ATCCAAAAAGAATCAACTCTCCATTTAGTCCTCAGACT 11450 Score = 111 bits (122), Expect = 2e-19 Identities = 166/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 26764 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAAT 26823 ||| ||||||| | |||||||| || || || || ||| | || ||| | ||| | ||| Sbjct 11000 ACATAATGCAAATCTTTGTAAAGACCTTGACCGGTAAAACTATTACCTTAGAAGTTGAAG 11059 Query 26824 CAAACGACACCATCGAGCAAGTCAA-ACAAAAGATTACCGACAAAGAAGGGATACCTCCC 26882 || ||||| || | ||||| || ||| || ||||||||||| || || ||| Sbjct 11060 GTTCTGATACCATTGAAAATGTCAAGACCAAA-ATCCAAGACAAAGAAGGTATCCCACCC 11118 Query 26883 GATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGAC 26942 || ||||||||||| |||| | || |||||| | ||||||| | | | || ||| Sbjct 11119 GACCAACAAAGACTTATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGAC 11178 Query 26943 TATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||| |||||||||||||| | ||| | || || | | |||||||| Sbjct 11179 TACAACATCCAAAAAGAATCTACCCTTCATTTAGTACTCCGTTTAAGAGGAGG 11231 >seq540 Length=89862 Score = 131 bits (144), Expect = 2e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 ||||||||| | |||||||| || ||||| |||||| | ||||| | ||| | ||| Sbjct 83628 AAAATGCAAATTTTTGTAAAGACTTTAACCGGAAAAACTATCACATTAGAAGTTGAAGGT 83687 Query 26826 AACGACACCATCGAGCAAGTCAA-ACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 |||||||| || | ||||| || ||| || || |||||||| || || ||||| Sbjct 83688 TCTGACACCATTGAAAATGTCAAGACCAAA-ATCCAAGATAAAGAAGGTATCCCACCCGA 83746 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 ||||||||||| || | | ||| |||||| | ||||||| | | | | || || || Sbjct 83747 CCAACAAAGACTAATCTTTGCCGGTAAACAATTGGAAGATGGTCGTACCCTCTCTGATTA 83806 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||| ||||| ||||| || ||||| |||| || ||| | ||||| || Sbjct 83807 TAACATCCAAAAGGAATCAACCCTCCATTTGGTACTTAGATTAAGAGGTGG 83857 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| ||||| || || || ||| | ||||| | ||| | || Sbjct 83859 ATGCAAATTTTTGTTAAAACCTTGACCGGTAAAACAATCACATTAGAAGTTGAGGGCTCT 83918 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | ||||| ||||| || |||||||| || || ||||||||| Sbjct 83919 GACACCATTGAAAACGTCAAGACCAAGATCCAAGATAAAGAAGGTATCCCACCCGATCAA 83978 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||||| |||| | ||| |||||| | ||||||| | | | | || || |||||| Sbjct 83979 CAAAGACTTATTTTTGCCGGTAAACAATTGGAAGATGGTCGTACCCTCTCTGATTATAAC 84038 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||||||||| || | ||| | ||||| ||||||||||| || Sbjct 84039 ATCCAAAAAGAATCAACCCTTCATTTAGTCCTCAGACTTAGAGGTGG 84085 Score = 125 bits (138), Expect = 7e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| ||||| || || || ||| | ||||| | ||| | ||| Sbjct 84315 ATGCAAATTTTTGTTAAAACCTTGACCGGTAAAACCATCACATTAGAAGTTGAAGGTTCT 84374 Query 26829 GACACCATCGAGCAAGTCAA-ACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||| || | ||||| || ||| || || |||||||| || || |||||||| Sbjct 84375 GACACCATTGAAAATGTCAAGACCAAA-ATCCAAGATAAAGAAGGTATCCCACCCGATCA 84433 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||||||||| |||| | ||| |||||| | ||||||| | | | | || || || || Sbjct 84434 ACAAAGACTTATTTTTGCCGGTAAACAATTGGAAGATGGTCGTACCCTCTCTGATTACAA 84493 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 ||| ||||||||||| || ||||||| || || ||| | ||||| || || Sbjct 84494 CATCCAAAAAGAATCAACCCTCCATCTCGTTCTTAGATTAAGAGGTGGTAA 84544 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || || || || ||| | ||||| | ||| | ||| Sbjct 84087 ATGCAAATCTTTGTTAAGACCTTGACCGGTAAAACTATCACATTAGAAGTTGAAGGTTCT 84146 Query 26829 GACACCATCGAGCAAGTCAA-ACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||| || | ||||| || ||| || || |||||||| || || ||||| || Sbjct 84147 GACACCATTGAAAATGTCAAGACCAAA-ATCCAAGATAAAGAAGGTATCCCACCCGACCA 84205 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||||||||| || | | ||| |||||| | ||||||| | | | || || ||||| Sbjct 84206 ACAAAGACTTATCTTTGCCGGTAAACAATTGGAAGATGGCCGTACCCTCTCTGATTATAA 84265 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||| ||||| ||||| ||| ||||| | || || ||||| ||||| || Sbjct 84266 CATCCAAAAGGAATCAACTCTCCATTTAGTTCTCAGACTCAGAGGTGG 84313 >seq391 Length=66319 Score = 86.0 bits (94), Expect = 6e-12 Identities = 132/187 (71%), Gaps = 6/187 (3%) Strand=Plus/Minus Query 26803 CGATCACCATCGAATTAGA---ATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTA 26859 |||| || ||||| |||| |||| ||||||||||| | ||||| || || Sbjct 37402 CGATTACTCTCGAAGTAGAGGGATCA---GACACCATCGAAAACGTCAAGGCTAAAATCC 37346 Query 26860 CCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCG 26919 ||||||||||| || || ||||||||||||||||| || | | || |||||| | | Sbjct 37345 AAGACAAAGAAGGTATCCCCCCCGATCAACAAAGACTTATCTTTGCTGGTAAACAATTAG 37286 Query 26920 AAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCC 26979 |||||| | | | | || || ||||| ||||| ||||| || ||||| | || | Sbjct 37285 AAGATGGTCGTACTTTACAAGATTACAACATCCAAAAGGAATCAACCCTCCATTTAGTTC 37226 Query 26980 TGAGACT 26986 | ||||| Sbjct 37225 TCAGACT 37219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478615885981280