Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_007710.1 Length=46643 Score E Sequences producing significant alignments: (Bits) Value seq5077 132 1e-26 >seq5077 Length=2402 Score = 132 bits (146), Expect = 1e-26 Identities = 314/460 (68%), Gaps = 22/460 (5%) Strand=Plus/Plus Query 35441 TTGCAGGTGAAGTTGCTCGACCCGCGTTTCGGCGATCTGTGGCCGTTGCCGGCCTATGCC 35500 ||||| | ||| | |||||||| || ||||| | | ||| |||||||||| ||| Sbjct 544 TTGCAAGCCAAGATCCTCGACCCCCGCATCGGCAACGAATTCCCGCTGCCGGCCTACGCC 603 Query 35501 ACCGAAGCCAGTGCAGGCATGGACCTGCGTGCCGCACT---GGAGG-CGCCGATGACGTT 35556 || || | || ||| | |||||||||||| || | ||| | ||| || || Sbjct 604 ACACCAGGCTCCGCCGGCCTCGACCTGCGTGCCATGCTCAAGCAGGACACCG-TGC--TT 660 Query 35557 GCAGCCGGGCGATGCGGCGCTGATTCCCAGCGGCATCGCGATCCATCTGGCCGACCCGCA 35616 | | || ||| | | |||||||| | |||| | ||||| | ||| ||||||| Sbjct 661 GAA-CCAGGCCAGACCATTCTGATTCCGACCGGCCTGTCGATCTACGTGGGCGACCCGGG 719 Query 35617 GCTGTGCGCGGTGATCCTGCCGCGCTCGGGGCTTGGCCATCGTCACGGCATCGTACTCGG 35676 ||| ||| |||||||||||||||| || || ||||| ||||||||||| ||||| Sbjct 720 CCTGGCGGCGCTGATCCTGCCGCGCTCCGGCCTGGGCCACAAACACGGCATCGTCCTCGG 779 Query 35677 CAAC--GGTACCGGCCTCATCGATGCGGATTACCAGGGGTCGTTGTTGATCAGCACCTGG 35734 |||| ||| || || ||||| |||| |||||||| |||| || | | |||| Sbjct 780 CAACCTGGT--GGGGCTGATCGACTCGGACTACCAGGGCGAGTTGATGGTGTCCTGCTGG 837 Query 35735 AATCGCGGCCGCGAGGCCTTCACCATCGAGCCG--GGCGACCGGATTGCGCAGCTGGTGA 35792 || || |||| || |||| ||| |||| ||||| || ||||| || || ||| Sbjct 838 AACCGTGGCCAGACCGCGTTCAATATC--GCCGTCGGCGAGCGCATTGCCCAACTCGTGC 895 Query 35793 TCCTGCCGGTCGTGC--GCGTAGGCTTGCGAG-TGGTGGACACTTTCGTCGACAGCGCGC 35849 | | ||||| |||| ||| | ||| |||| |||| || |||| ||| | | Sbjct 896 TGGTACCGGTGGTGCAGGCGCA--CTT-CGAGCTGGTCGAAGAGTTCGACGAAACACAAC 952 Query 35850 GCGGCGCGGGTGGATTCGGTCACACCGGCGTGCGCTGACT 35889 ||||||| ||||| ||||| || ||||| | |||||| Sbjct 953 GCGGCGCAGGTGGCTTCGGGCATTCCGGCAGCCACTGACT 992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149122232323740