Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_007805.1 Length=39199 Score E Sequences producing significant alignments: (Bits) Value seq1340 120 8e-23 seq4890 118 3e-22 >seq1340 Length=18762 Score = 120 bits (132), Expect = 8e-23 Identities = 311/472 (66%), Gaps = 4/472 (1%) Strand=Plus/Minus Query 767 GCCATCCTGAACGCCATGGGTAACGACCTGATTCGGGTCGTAAACTTCGTGAAGTCGGCA 826 |||||| |||| || ||||| | |||| || || | || || | |||||||| || Sbjct 18756 GCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCC 18697 Query 827 CGCATCGGCTACACGAAAATGCTGATGGCCAACATCGGCTACAAGATTCAGCACAAGCGC 886 || |||| || | ||||||||| ||| | |||| || |||| |||| Sbjct 18696 CGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTATGCCTACTTTATAGAGCATAAGCAG 18637 Query 887 CGTAATGTGCTGATGTGGAGCCCGACTGACCCAGACGCCGAGGGGATCAGCAAGAGCCAC 946 || || || || ||| ||||| || || |||||| | | || | |||| Sbjct 18636 CGCAACACACTTATCTGGTTGCCGACGGATGGTGATGCCGAGAACTTTATGAAAACCCAC 18577 Query 947 GTTAAT--GGCCTGATTCGCGATGTTCCGGTGCTGCTGGCGCTGGCCCCATGGTATGGCC 1004 ||| | | || || |||||| ||||| ||||||||||||||| || ||||||||| Sbjct 18576 GTTGAGCCGACC--ATCCGCGATATTCCGTCGCTGCTGGCGCTGGCTCCGTGGTATGGCA 18519 Query 1005 GCAAGCATAGCGACAACACGCTCGACACCAAGGTGTTTGCAAACCGGCGGACCCTTTGGA 1064 ||||| | || ||||||||| | ||| ||| | || | || | | ||| Sbjct 18518 AAAAGCACCGGGATAACACGCTCACTATGAAGCGTTTTTCCAATGGTCGTGGCTTCTGGT 18459 Query 1065 CGCTCGGCGGCAAGGCTGCTCGCAACTACCGTGAGAGATCTGCCGACGAGGTGATCTATG 1124 || ||||| || || || ||||||||||| | || | || | || | |||| Sbjct 18458 GCCTGGGCGGTAAAGCGGCAAAAAACTACCGTGAAAAGTCGGTGGATGTGGCGGGTTATG 18399 Query 1125 ACGAGCTGTCGAAGTTCGACGCCGATATTGAAGGTGAAGGTTCCCCAACGTTCCTTGGCG 1184 | || || | || || | ||||||||| ||||| || || ||||||||||||| Sbjct 18398 ATGAACTTGCTGCCTTTGATGAGGATATTGAACAGGAAGGCTCTCCGACGTTCCTTGGCG 18339 Query 1185 ACCAACGTCTGCGCGGTGCTGTTTACCCGAAGTCCATCCGTGGATCGACGCC 1236 || ||||| | || | || | || |||||||||||||| || ||||| Sbjct 18338 ACAAACGTATTGAAGGCTCGGTCTGGCCAAAGTCCATCCGTGGCTCCACGCC 18287 >seq4890 Length=1750 Score = 118 bits (130), Expect = 3e-22 Identities = 97/118 (82%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 29900 CCACCGGTGGCCGTCCGATCGCTGTGTATGACCTGATCGAGAGGGATACTCACCTGGTCG 29959 ||||||| ||||| ||||| | ||| || ||||||| |||| | ||||| || ||||||| Sbjct 4 CCACCGGCGGCCGACCGATTGATGTCTACGACCTGACCGAGCGTGATACGCATCTGGTCG 63 Query 29960 TTGCTGGTTACAGCGATGAGCATCGTGCCCGAGTGATCGACCGCTGGCAGCAGCTTGA 30017 | ||||| |||||||| ||||| || || ||||| ||||||||||||||| | || || Sbjct 64 TGGCTGGCTACAGCGACGAGCACCGCGCACGAGTTATCGACCGCTGGCAGGAACTGGA 121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125303631370668