Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq7424 89.7 6e-13 >seq7424 Length=582 Score = 89.7 bits (98), Expect = 6e-13 Identities = 176/255 (69%), Gaps = 4/255 (2%) Strand=Plus/Plus Query 107552 CGAGAAACAAGTATATCGCATTGACCATTATCTCGGTAAAGATACTGTCAATAACATTCT 107611 ||| |||||| | || | ||||||||||| || || ||||| || ||| | |||||| | Sbjct 82 CGAAAAACAAATTTACAGGATTGACCATTACCTGGGCAAAGAAACCGTCCAGAACATTAT 141 Query 107612 TGCTACTCGCTTCAGCAACAT-TCTTCTTGAACCACTTTGGAACAGGCAGTATGTAGAAG 107670 || || || |||| | ||| || ||||| || ||||||||| ||| | || Sbjct 142 GGC-CTTCCGTTTTGCAAATTCTCTACTGGAACCGCTCTGGAACAGGACTTATATTGACC 200 Query 107671 AAGTGCAGATCTTTGCGTCCGAGACTATTGGTTG-TGAGGGTCGTGCCCAGTATTATGAG 107729 | || ||||| | | | |||| || ||| || || || |||| ||||| || Sbjct 201 ACGTTCAGATATCGGTGACCGA-ACAGCTGGGTGTTGGGGACCGTGGTGGCTATTACGAA 259 Query 107730 ACCGCTGGTGCTGTCAGGGATATGCTGCAGAATCACATTCTGCAAGTGTTGGCATTGATA 107789 | ||| |||||| | ||||| ||| | ||||| |||||| ||||| || | |||| Sbjct 260 AGCGCCGGTGCTTTAAGGGACATGATCCAGAACCACATTTTGCAATTGCTATGTCTGATT 319 Query 107790 GCAATGGAAGCACCT 107804 | ||||||| | ||| Sbjct 320 GGAATGGAAACCCCT 334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567176879230400