Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1703 98.7 2e-15 seq1283 98.7 2e-15 seq367 98.7 2e-15 seq119 98.7 2e-15 seq972 89.7 1e-12 seq971 89.7 1e-12 seq969 89.7 1e-12 seq968 89.7 1e-12 >seq1703 Length=2908 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||||||| Sbjct 100 GCCCGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGC 159 Query 142564 CCCACATCGGGC 142575 ||| | | |||| Sbjct 160 CCCCCGTTGGGC 171 >seq1283 Length=375 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||||||| Sbjct 145 GCCCGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGC 86 Query 142564 CCCACATCGGGC 142575 ||| | | |||| Sbjct 85 CCCCCGTTGGGC 74 >seq367 Length=125687 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||||||| Sbjct 106826 GCCCGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGC 106885 Query 142564 CCCACATCGGGC 142575 ||| | | |||| Sbjct 106886 CCCCCGTTGGGC 106897 >seq119 Length=56996 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||||||| Sbjct 55442 GCCCGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGC 55501 Query 142564 CCCACATCGGGC 142575 ||| | | |||| Sbjct 55502 CCCCCGTTGGGC 55513 >seq972 Length=442 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||| |||||||||||||||||||||| || || |||| || ||||||| |||||||||| Sbjct 315 GCCCAGTTAGCTCAGTCGGTAGAGCGCAAGGCTTTTAACCTTGTGGTCGAGGGTTCGAGC 256 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 255 CCCTCATTGGGC 244 >seq971 Length=617 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||| |||||||||||||||||||||| || || |||| || ||||||| |||||||||| Sbjct 519 GCCCAGTTAGCTCAGTCGGTAGAGCGCAAGGCTTTTAACCTTGTGGTCGAGGGTTCGAGC 460 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 459 CCCTCATTGGGC 448 >seq969 Length=577 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||| |||||||||||||||||||||| || || |||| || ||||||| |||||||||| Sbjct 499 GCCCAGTTAGCTCAGTCGGTAGAGCGCAAGGCTTTTAACCTTGTGGTCGAGGGTTCGAGC 440 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 439 CCCTCATTGGGC 428 >seq968 Length=747 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||| |||||||||||||||||||||| || || |||| || ||||||| |||||||||| Sbjct 661 GCCCAGTTAGCTCAGTCGGTAGAGCGCAAGGCTTTTAACCTTGTGGTCGAGGGTTCGAGC 602 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 601 CCCTCATTGGGC 590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027734422957934