Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_010355.1 Length=62337 Score E Sequences producing significant alignments: (Bits) Value seq82 114 5e-21 >seq82 Length=463168 Score = 114 bits (126), Expect = 5e-21 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 6469 TTCGTCGAAAGAATAGAACGACTTGAGGAGGAAAAGAGCGGTCTCCAGGAGGACATCAAG 6528 ||| |||| | || || || |||||||| ||||||| | || ||||| ||||||||| Sbjct 392929 TTCATCGAGCGCATCGAGCGCCTTGAGGAAGAAAAGACCACGCTTCAGGACGACATCAAG 392988 Query 6529 GAAGTCTACTCGGAAGCCAAGGGCACCGGGTTCGACGTCAAGATCATTCGGCAGATCATC 6588 ||||| |||||||||||||| ||| | |||| ||||||||| || |||| || Sbjct 392989 GAAGTGATGGCGGAAGCCAAGGGCCGCGGCTACGACACCAAGATCATCCGCACGATCGTC 393048 Query 6589 CGCTTGCGGAAGATGGACAAGGCCGACCGGCAGGAACAGCGCGCCATCCTCGAAATGTAC 6648 ||| |||| |||| ||| | ||| || ||||| || || |||||||| ||||| Sbjct 393049 CGCCTGCGCAAGAAGGATGCGAACGAGCGCAAGGAAGAGGAAGCGATCCTCGAGCTGTAC 393108 Query 6649 GAGGAAGCGCTCGGGATG 6666 | | || ||||| ||| Sbjct 393109 ATGAACGCCCTCGGCATG 393126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199334712118572