Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_011103.1 Length=60195 Score E Sequences producing significant alignments: (Bits) Value seq520 98.7 4e-16 >seq520 Length=453493 Score = 98.7 bits (108), Expect = 4e-16 Identities = 194/279 (70%), Gaps = 10/279 (4%) Strand=Plus/Plus Query 43304 TTGTTCTCACCAGCAAGCTGATCGACGGCACTTTCCCTGACTATCAGCGCGTCATCCCCA 43363 ||||||| ||| ||||||||| |||||||| ||||| ||||||||||||||||| || Sbjct 294701 TTGTTCTGACCTCCAAGCTGATTGACGGCACCTTCCCGGACTATCAGCGCGTCATTCCAT 294760 Query 43364 CCCAGAACGACAAGAAGATCGTCTTCGGCAGCGATGACATGCGCCAGGCAGCC-TCG--C 43420 || ||||||||||| | | ||| | || | || | ||| | | ||| | | | Sbjct 294761 CCGGCAACGACAAGAAACTGACCATCGACCGCCA-GAGCTTCGC--GTCTGCCGTTGACC 294817 Query 43421 GCGTCTCTGTGATCTCGTCTGAGCGTGGCCGCGCGGTGAAGTTATCCTTCGCGGAGGGGG 43480 ||||||| ||| ||| ||||||||||| || || ||| | | | || || || Sbjct 294818 GCGTCTCGACGATTTCGAGCGAGCGTGGCCGTGCCGTCAAGCTGACGATTGCCGATGGCC 294877 Query 43481 AAGCGAAGCTGGCCGTGAGCAGTCCGGAAACCGGAAGCGCCACCGACGAAATCTTCG--T 43538 | || || | || | || |||||| | || |||||||| ||||| | | || | Sbjct 294878 AGCTGACATTGACGGTCAACAATCCGGATTCGGGCAGCGCCACGGACGAGCT-TGCGGCT 294936 Query 43539 GAACTACGATGGCGACCCGATCGATATCGGATTCAACGC 43577 | | || || ||| |||||||| ||||| ||||| || Sbjct 294937 G-ATTATGACTCCGATCCGATCGAGATCGGCTTCAATGC 294974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192484628900316