Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_011222.1 Length=44929 Score E Sequences producing significant alignments: (Bits) Value seq3281 100 8e-17 >seq3281 Length=2714 Score = 100 bits (110), Expect = 8e-17 Identities = 158/222 (71%), Gaps = 11/222 (5%) Strand=Plus/Plus Query 20131 AACCCGGAGTCAAGAAGGCTAATTGTTAGTGCTTGGAATGTTGGAGAAATACA-CATGAT 20189 || || || || |||||| | ||||| ||| |||||||| | ||| ||| | ||| || Sbjct 1961 AATCCCGATTCCAGAAGGATTATTGTGTCTGCCTGGAATGTGGCAGAGATAGAACAT-AT 2019 Query 20190 GGCACTTCCTCCGTGCCACTGCTTTTTTCAGTTCTATGTGTCTGAGTCCGGTTATTTGGA 20249 ||||||||| || ||||| |||||| ||||| ||||| |||| ||| | || Sbjct 2020 GGCACTTCCACCCTGCCATGCCTTTTTCCAGTTTTATGTAGCTGA---CGGAAAACTGAG 2076 Query 20250 CTTGAAACTGTACCAAAGAAGCGCAGACCTATTTTTAGGCGTTCCTTTCAATATTGCATC 20309 || | || || || |||| ||||| | ||| | || || ||||| || ||||| || Sbjct 2077 CTGTCAGCTTTATCAGCGAAGTGCAGATATTTTTCTGGGGGTACCTTTTAACATTGCCTC 2136 Query 20310 TTATTCTATCTTGCTGTCT---ATGGCTGCACAGGTTTGCGG 20348 ||| | ||| ||| || |||| ||||||||||||||| Sbjct 2137 CTATGC---CTTACTGACTATGATGGTTGCACAGGTTTGCGG 2175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143637938659908