Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq982 107 2e-18 seq322 102 8e-17 seq540 93.3 4e-14 seq54 93.3 4e-14 seq391 87.8 2e-12 >seq982 Length=41121 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 || ||||| | | |||| |||||||| |||||||||||| | |||||| || || Sbjct 2158 ACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAGTCGGATAAAGTACGACCATCTTCC 2217 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||||||||| | |||| || | |||||||| || || |||||||||||||| | Sbjct 2218 AATTGTTTACCGGCAAAGATAAGTCTTTGTTGGTCGGGTGGGATACCTTCTTTGTCTTGG 2277 Query 138526 ATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTA 138585 || || || | | ||| | |||||| | || || || | || | |||||| Sbjct 2278 ATCTTGGTCTTGACGTTTTCGATGGTGTCAGAACCTTCGACTTCCAAGGTGATTGTTTTA 2337 Query 138586 CCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || |||| || |||||||| || ||||| Sbjct 2338 CCGGTCAAGGTCTTTACAAAGATTTGCAT 2366 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 |||||||| | |||| || ||||| |||||||||||| | |||||| || || Sbjct 2614 ACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCGGATAAAGTACGACCATCTTCT 2673 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||||||||| | || || | ||||| || || || |||||||||||||| || Sbjct 2674 AATTGTTTACCGGCGAAAATAAGTCTTTGTTGATCAGGTGGGATACCTTCTTTGTC-TTG 2732 Query 138526 ATTTTTTGT-TTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 | | || || || | | ||| | |||||| | || || || | || | ||||| Sbjct 2733 AATCTTGGTCTTGACATTTTCAATGGTGTCAGAACCTTCAACTTCCAAGGTGATTGTTTT 2792 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| |||| || ||||||||||| |||||| Sbjct 2793 ACCGGTCAAGGTCTTTACAAAAATTTGCATG 2823 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 || ||||| | | |||| ||||||||||||||||||||| | |||||| || || Sbjct 2386 ACCAAATGGAGGGTTGATTCCTTTTGAATGTTGTAGTCGGATAAAGTACGACCATCTTCC 2445 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||||||| | | || || | ||||| || || || |||||||||||||| | Sbjct 2446 AATTGTTTACCAGCGAAAATAAGTCTTTGTTGATCGGGTGGGATACCTTCTTTGTCTTGG 2505 Query 138526 ATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTA 138585 || || || | | ||| | |||||| | || || || | || | |||||| Sbjct 2506 ATCTTGGTCTTGACATTTTCAATGGTGTCAGAACCTTCAACTTCCAAGGTGATAGTTTTA 2565 Query 138586 CCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || |||| || || |||||||| ||||| Sbjct 2566 CCGGTCAAGGTCTTGACAAAAATTTGCAT 2594 >seq322 Length=112280 Score = 102 bits (112), Expect = 8e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 |||||||| | |||| || ||||| |||||||||||| | |||||| || || Sbjct 11441 ACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCGGATAAAGTACGACCATCTTCC 11382 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||||||| | | | || || | ||||| || || || |||||||||||||| || Sbjct 11381 AATTGTTTACCAGCAAAAATAAGTCTTTGTTGATCGGGTGGGATACCTTCTTTGTC-TTG 11323 Query 138526 ATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 |||| ||||||| | ||| | |||||| | || || || | || | ||||| Sbjct 11322 GATTTTGGTTTTAACGTTTTCGATGGTGTCAGAACCTTCAACTTCTAAGGTAATAGTTTT 11263 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| |||| || || |||||||| ||||| Sbjct 11262 ACCGGTCAAGGTCTTGACAAAAATTTGCAT 11233 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||||| | |||||||| | | | || || ||||| ||||||||||| Sbjct 11231 CCTCCTCTTAAACGGAGTACTAAATGAAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAG 11172 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | ||||||||| | | | || || | |||||||| || || Sbjct 11171 AGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATAAGTCTTTGTTGGTCGGGTGGG 11112 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||||||||| |||||| || | | ||| | ||| || | || || Sbjct 11111 ATACCTTCTTTGTCTTGGATTTTGGTCTTGACATTTTCAATGGTATCAGAACCTTCAACT 11052 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | |||||||| |||| || |||||||| || ||||| Sbjct 11051 TCTAAGGTAATAGTTTTACCGGTCAAGGTCTTTACAAAGATTTGCAT 11005 Score = 82.4 bits (90), Expect = 8e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||||||||| | | || || ||||| ||||||||||| | ||||| ||| || Sbjct 11670 AACTAAATGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTACGACCGTCTTC 11611 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | ||||||||| | | | || || | |||||||| || || |||||||||||||| Sbjct 11610 TAATTGTTTACCAGCAAAAATGAGTCTTTGTTGGTCGGGTGGGATACCTTCTTTGTCTTG 11551 Query 138525 GATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 ||| || |||| | || | ||| || | || || || | || | ||||| Sbjct 11550 GATCTTGGTCTTTACATTCTCAATGGTATCAGAACCTTCAACTTCTAAGGTAATAGTTTT 11491 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| |||| || |||||||| || ||||| Sbjct 11490 ACCGGTCAAGGTCTTTACAAAGATTTGCAT 11461 >seq540 Length=89862 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 || ||||| | | |||| |||||||| ||||| || || | ||||| || || Sbjct 83839 ACCAAATGGAGGGTTGATTCCTTTTGGATGTTATAATCAGAGAGGGTACGACCATCTTCC 83780 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||||||||| | ||||||| | |||||||| || || ||||||||||| || | Sbjct 83779 AATTGTTTACCGGCAAAGATTAGTCTTTGTTGGTCGGGTGGGATACCTTCTTTATCTTGG 83720 Query 138526 ATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTA 138585 ||||| || | | ||| | |||||| | || || || | || | ||||| Sbjct 83719 ATTTTGGTCTTGACATTTTCAATGGTGTCAGAACCTTCAACTTCTAATGTGATAGTTTTT 83660 Query 138586 CCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || | ||| ||||||||||| ||||| Sbjct 83659 CCGGTTAAAGTCTTTACAAAAATTTGCAT 83631 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||||||||| | |||| |||||||| ||||| || || | ||||| || || Sbjct 84296 AACTAAATGGAGAGTTGATTCCTTTTGGATGTTATAATCAGAGAGGGTACGGCCATCTTC 84237 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | ||||||||||| | |||| || | |||||||| || || ||||||||||| || Sbjct 84236 CAATTGTTTACCGGCAAAGATAAGTCTTTGTTGGTCGGGTGGGATACCTTCTTTATCTTG 84177 Query 138525 GATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 |||||| || | | ||| | |||||| | || || || | || | ||||| Sbjct 84176 GATTTTGGTCTTGACATTTTCAATGGTGTCAGAACCTTCAACTTCTAATGTGATAGTTTT 84117 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| |||| || || ||||| || ||||| Sbjct 84116 ACCGGTCAAGGTCTTAACAAAGATTTGCAT 84087 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 |||||||| | | |||| || ||||| ||||| || || | ||||| || || Sbjct 84067 ACTAAATGAAGGGTTGATTCTTTTTGGATGTTATAATCAGAGAGGGTACGACCATCTTCC 84008 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||||||||| | | || || | ||||| || || || ||||||||||| || | Sbjct 84007 AATTGTTTACCGGCAAAAATAAGTCTTTGTTGATCGGGTGGGATACCTTCTTTATCTTGG 83948 Query 138526 ATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTA 138585 || || || | | ||| | |||||| | ||| || || | || | |||||| Sbjct 83947 ATCTTGGTCTTGACGTTTTCAATGGTGTCAGAGCCCTCAACTTCTAATGTGATTGTTTTA 83888 Query 138586 CCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || |||| ||||| |||||||| ||||| Sbjct 83887 CCGGTCAAGGTTTTAACAAAAATTTGCAT 83859 Score = 82.4 bits (90), Expect = 8e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| | ||| | | |||| || ||||| |||||||| || | ||||| || || Sbjct 84524 AACGAGATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAGAGGGTACGACCATCTTC 84465 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | ||||||||||| | | || || | ||||| || || || ||||||||||| || Sbjct 84464 CAATTGTTTACCGGCAAAAATAAGTCTTTGTTGATCGGGTGGGATACCTTCTTTATCTTG 84405 Query 138525 GATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 |||||| || | | ||| | |||||| | || || || | || | ||||| Sbjct 84404 GATTTTGGTCTTGACATTTTCAATGGTGTCAGAACCTTCAACTTCTAATGTGATGGTTTT 84345 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| |||| ||||| |||||||| ||||| Sbjct 84344 ACCGGTCAAGGTTTTAACAAAAATTTGCAT 84315 >seq54 Length=99412 Score = 93.3 bits (102), Expect = 4e-14 Identities = 210/316 (66%), Gaps = 0/316 (0%) Strand=Plus/Minus Query 154248 TAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGA 154307 |||||||| || |||||||| || | | ||||| |||||| || | | || || Sbjct 89718 TAGATGCCATCAATGCTATCTTCCTTCATGGTGAGCAGGAAACAGGAGGATAGCTGTGGT 89659 Query 154308 ATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATC 154367 | ||||||| || ||| ||||| || | || || |||||| |||| | | | Sbjct 89658 TTAGGCGTTCCTGCATTAAAAAGGGTAGGGGTAGCATGTGTAAACCACTTTTCGGAGAGC 89599 Query 154368 ATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGC 154427 | | |||| |||| |||||| | |||||| || ||||||||| | || || ||| Sbjct 89598 AGGTGGTAGGTTTGGATGGCTGATGTGATATCTTCTTTGTGAATGCCTACGGCCACCCGC 89539 Query 154428 ATGAGCATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTT 154487 |||||||| |||||||| | ||| | | | || | | ||| | |||||| || Sbjct 89538 ATGAGCATATGCTGCGGTCTTTCCACAATTTTACCATGTAGCTTGAGTAGATATGACCTT 89479 Query 154488 TCGAGGGTTTTGTAACCGAAATACTTGTATTCAAAATCTAGCTCATGAGCGATGGCCGCA 154547 || | ||| || | || || || | || ||| ||||| | |||| | | |||| | Sbjct 89478 TCTAAGGTCTTAAAGCCAAAGTAATCATAATCATAATCTCGATCATAAACAATGGTGTTA 89419 Query 154548 TCGAGCGTCGCGGCAT 154563 || || | ||||||| Sbjct 89418 TCTAGAATAGCGGCAT 89403 >seq391 Length=66319 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||||||||| | | |||| |||||||| |||||||| || | |||||| || || Sbjct 37227 AACTAAATGGAGGGTTGATTCCTTTTGGATGTTGTAATCTTGTAAAGTACGACCATCTTC 37286 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | ||||||||| | | |||| || | ||||| || || || |||||||||||||| Sbjct 37287 TAATTGTTTACCAGCAAAGATAAGTCTTTGTTGATCGGGGGGGATACCTTCTTTGTCTTG 37346 Query 138525 GATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 |||||| || | | ||| | |||||| | ||| || |||| || | ||| || Sbjct 37347 GATTTTAGCCTTGACGTTTTCGATGGTGTCTGATCCCTCTACTTCGAGAGTAATCGTCTT 37406 Query 138585 ACC 138587 ||| Sbjct 37407 ACC 37409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496214175701280