Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq7157 116 1e-21 >seq7157 Length=721 Score = 116 bits (128), Expect = 1e-21 Identities = 210/303 (69%), Gaps = 7/303 (2%) Strand=Plus/Minus Query 9119 CGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCC 9178 |||||||||||| || ||||||||||| ||||| |||||||||| ||||||| ||| Sbjct 385 CGTCAACAAAGTGATTCTCGTCGGCAACGCCGGCGGCGACCCGGAAGTCCGCTACACCCC 326 Query 9179 GAGCGGCGACGCAATCTCCAATATCCGTCTCGCGACGACCGATCGCTACAAGGACAAGGC 9238 || |||| |||| | | || || || || || | ||| ||| || || ||| Sbjct 325 GAACGGCAACGCCGTAACGAACATAACCCTGGCCACCAGCGAAAGCTGGAAAGATAAGCA 266 Query 9239 GAGCGGCGAGTTCAAGGAAGTGACCGAGTGGCACCGCGTCGCTTTCTTCGGCCGCCTCGC 9298 || |||| || |||| ||||||||||||||||| | ||||||||| |||| Sbjct 265 GACCGGCCAGCAGCAGGAGCGTACCGAGTGGCACCGCGTAGTGTTCTTCGGCAAGATCGC 206 Query 9299 CGAGATCGTCGACGAGCACCTTCG-CAAGGGCGCATCGGT-CTACATCGAGGGGCGCATC 9356 ||| |||| | ||| | || || ||||| || | || |||| |||| || || Sbjct 205 CGAAATCGCGGGTGAGTATCTGCGAAAAGGGAGC--CAGTGCTACGTCGAAGGCACTCTC 148 Query 9357 AAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGAGATCGTCGCC 9416 || || |||| ||| || ||| | | |||||||| ||||||||||||| | Sbjct 147 CGCACCCGCGAGTG---GGAAAAAGACGGAGTGAAACGCTACACCACCGAGATCGTCGTC 91 Query 9417 GAC 9419 ||| Sbjct 90 GAC 88 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200544197514264