Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_015250.1 Length=159801 Score E Sequences producing significant alignments: (Bits) Value seq7039 96.9 4e-15 seq54 84.2 2e-11 >seq7039 Length=691 Score = 96.9 bits (106), Expect = 4e-15 Identities = 69/78 (88%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 69740 TGGTGGGCCCAGCAGGACTCGAACCTGAAACCAACGGATTATGAGTCCGCTGCTCT-GCC 69798 |||||||||||| ||||||||||||| ||||| ||||||||||||| ||||||| || Sbjct 428 TGGTGGGCCCAGTAGGACTCGAACCTACGACCAAGGGATTATGAGTCCCCTGCTCTAACC 369 Query 69799 AATTGAGCTATAGGCCCT 69816 || ||||||||||||||| Sbjct 368 AACTGAGCTATAGGCCCT 351 >seq54 Length=99412 Score = 84.2 bits (92), Expect = 2e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 69742 GTGGGCCCAGCAGGACTCGAACCTGAAACCAACGGATTATGAGTCCGCTGCTCT-GCCAA 69800 ||||||||| ||||||| ||||||| |||| | ||||||||||| | |||||| |||| Sbjct 54631 GTGGGCCCACCAGGACTTGAACCTGGGACCACCTGATTATGAGTCAGGTGCTCTAACCAA 54690 Query 69801 TTGAGCTATAGGCCCT 69816 ||||||||||||||| Sbjct 54691 CTGAGCTATAGGCCCT 54706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511185520719440