Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_015293.1 Length=30651 Score E Sequences producing significant alignments: (Bits) Value seq4209 89.7 1e-13 >seq4209 Length=1822 Score = 89.7 bits (98), Expect = 1e-13 Identities = 182/270 (67%), Gaps = 3/270 (1%) Strand=Plus/Plus Query 1998 TCAACAACAATTTCAGTGGTGTACTTTTCTTGACCTTGTTGGTCAGTCCATTTGCGGGTT 2057 || || | |||||| ||||||||| || ||| | || || ||| | || ||| Sbjct 358 TCGACGATAATTTCGGTGGTGTACCGTTTGATACCGTCTTTTTC---CCACTCTCGTGTT 414 Query 2058 TTTAACTTGCCTTCAATGTATAGCTTACTACCCTTACGTACATACTCGCCGATTATTTCA 2117 | | ||| ||||| ||||||| || || || || | |||||| || |||||| Sbjct 415 TGAAGCTTACCTTCGATGTATACCTGCGATCCTTTCCGCAGATACTCACCAGCGATTTCA 474 Query 2118 GCTAACTTTCCAAAAACAACAATTCTGTGCCACTCGGTTTCTTCTTTTGGCTCGCCAGTG 2177 || | || ||||| | | || | |||||| ||||| | ||| | || || || Sbjct 475 GCGACTTTCCCAAACAAAGAAACACGGTGCCATTCGGTCTTTTCGACTTTCTGTCCCGTT 534 Query 2178 CTTTTATCCTTCCATTTTTCGCTAGTTGCTAGAGTTAGGTTTGCCACTGCATTTCCGTTA 2237 || || |||| | || || ||||| || | || || | |||||||| ||||| Sbjct 535 TGCTTGTCAGTCCACTGCTCACTTGTTGCAAGGCTGAGATTGGTTACTGCATTACCGTTC 594 Query 2238 GGTATGTAACGAATTTCTGGATCTTGACCA 2267 |||| ||| ||| ||||||||||||||||| Sbjct 595 GGTAAGTAGCGAGTTTCTGGATCTTGACCA 624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97952556552444