Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq54 347 1e-90 seq332 320 2e-82 seq1819 215 6e-51 seq222 206 3e-48 seq202 86.0 7e-12 >seq54 Length=99412 Score = 347 bits (384), Expect = 1e-90 Identities = 639/921 (69%), Gaps = 33/921 (4%) Strand=Plus/Minus Query 18669 TTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACA 18728 |||||| ||||| | || | ||||||||||||||| ||||| || | || || || || Sbjct 88915 TTTTTGGTATTCACCTACGCGTTTTTCAAAGAAATTGGTTTTCCCTTGTAGGGAGAT-CA 88857 Query 18729 T-TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATA 18787 | |||||||| || |||||||| | || || |||| || | |||||||| | || Sbjct 88856 TCTCCATAAAGTCGAATGGATTGGTCACGTTGTATACCTTAGAACACCCTAATTCAAGTA 88797 Query 18788 GTAGTCTATCCGCTACAAATTTAATATA-TGTGTTCATCATATCACAATTCATTCCTATT 18846 || | ||| || ||||| | || || ||| ||||||| || |||||| || || Sbjct 88796 ATAACCGATCAGCGACAAACTCGATGTACTGT-TTCATCAAGTCGGCATTCATGCCAATG 88738 Query 18847 AATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATA 18906 | |||||||||| |||||| || | |||||| ||||| || |||||| || | ||| Sbjct 88737 AGCTTAACAGGTAATGCATCAGTGACAAATTCCTGTTCAATTGCTACTGCATCGGTAATA 88678 Query 18907 ATAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTT---AAACATCAAACAT 18963 || | || || |||| | | | | | | || || | ||| | || Sbjct 88677 ATTTCTTTTACCCTTTCTTGTGGAAGTTGATTTTTTAAGTGCTTGGTATACAATAGGCAA 88618 Query 18964 GCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCA 19023 ||||| |||||||| | ||| ||||| ||| || | ||| || || || | | ||| Sbjct 88617 GCAAAGTCACAATGCAATCCTTCGTCCCTAGAAATGAGTTCGTTGGAGAAGCTAAGACCG 88558 Query 19024 GGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGAT-CCAGAAAAGAATAT 19082 ||||| | ||| |||||||| | |||||| || || ||||| | | ||||| ||||| || Sbjct 88557 GGCATTAATCCCCTTTTTTTGAGCCAGAAGATCGA-GCAAAAGCTACCAGAGAAGAAAAT 88499 Query 19083 ACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAAT 19142 |||||||| |||||||| |||| |||||||| || |||| || || | | || Sbjct 88498 GCCTTCTACAGCTGCAAAGGCAATGAGTCTTTCAGCAAAACTCGC----TTGGTCT--AT 88445 Query 19143 CCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAA 19202 ||| | ||||| || || || || || ||||| | || || || | ||| || Sbjct 88444 CCAACGTAAAGCCCATTCTGCTTTTTTCTTAACACAGTCGAGGGTGTCGATGGCATTGAA 88385 Query 19203 TAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAA--ACTGTACA-- 19258 || | | || | | ||| |||| || | ||||||| | | || | | Sbjct 88384 AAGGCGATTTCTTTCTTGAGGATCCTTAATGTAGG----TATCAATGAGGAGTGAATAGG 88329 Query 19259 TTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTA 19318 |||||||||| ||||| |||| ||| ||||| || || ||||| || | || ||||| Sbjct 88328 TTTCTGAATGGATATTCTCTACAGCAATCTGGAAGCCATAAAAGAATTTGGCCTCTGTAT 88269 Query 19319 TCTGTACTTCA-CTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCT 19377 |||||||||| ||||||| | |||| | |||||||||||||| || || ||||||||| Sbjct 88268 ACTGTACTTCAGCTACAAAGT-TTTCTGCTAAATTTTCATTAACAATACCGTCACTAGCT 88210 Query 19378 GCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTA----TT 19433 ||||| || || ||||| || ||||| ||| |||||| |||| | | Sbjct 88209 GCAAAGAAAGCCAATACGTGAGAGATAAAGTGTCGTTCATC----GTTATTCAAGCGGGC 88154 Query 19434 CCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGC 19493 ||| || || | |||| | ||| || | || ||| | |||||||| ||| ||||| Sbjct 88153 CCAGTCTTTGAGGTCTTGACTTAAGTCAATCTCCTCAGCGGTCCAAAAGCTAGCTTCTGC 88094 Query 19494 TTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTT 19553 ||| ||||| | ||||||||||||| ||| || ||||| |||| ||||||| |||||| Sbjct 88093 TTTCTTATAAAAGTTCCATATATCATGATGTTCGATAGGGAATAATACAAATCGATTTTT 88034 Query 19554 ATTTTCTTTAAGAATAGGTTC 19574 |||||||| | |||||| || Sbjct 88033 ATTTTCTTGTAAAATAGGCTC 88013 Score = 132 bits (146), Expect = 5e-26 Identities = 589/924 (64%), Gaps = 14/924 (2%) Strand=Plus/Minus Query 47880 GCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCA 47939 || ||||| || || || || || || ||||||| || ||||| | || |||||| Sbjct 90372 GCAATAGAGGCCAGGTTGCACACCGCAACCTCATCGGGTGATGTATACTCGATGATTTCA 90313 Query 47940 GCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTA---TTNNNNTTGTTA 47996 | |||||| || | | || ||||| || ||||||| ||||| || ||| | Sbjct 90312 GTACATAGGTTGCTTGACTTAATAGTTCCTAAATTTTTCTGATTCGATTTTCTATTGGCA 90253 Query 47997 CATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGAT 48056 | |||||| || | |||| |||| | || ||||| ||||| | || | ||| | Sbjct 90252 CT---GTCCTTATACAACATATAAGGCATGCCCGTTTCGATCTGGGCCTCTAGGATGGCA 90196 Query 48057 TTCCAAACAGTCCTAGC-CTTTATAACAGCT-CTAGCTTTATTATCATGTTCGTATTTAG 48114 ||| |||| || | ||||| | | | || || || |||| || || | Sbjct 90195 AACCA--CAGTTCTTGTGCTTTAATGGATTTTCGGGCCTTTCCTTCTCGTTCATACTTTG 90138 Query 48115 TATATAACTTCTCAAATTCATCCCCATACACATTAT-CTAACCCAGGACATTCATTAGGA 48173 ||||||| ||||| | || ||||| ||| | | | | || || |||||| || Sbjct 90137 TATATAAGGCTTCAAAGGCTTCTCCATA-ACAGTCTGCCAGTCCCGGTGCTTCATTGGGG 90079 Query 48174 CACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAA 48233 || | | ||||| || |||| || | ||| | ||| || | || | ||||| Sbjct 90078 CAAAAGAGCGACCATTCTTCATTGTTCTCTACACGTTGCATGAAAAGGTCAGAAATCCAG 90019 Query 48234 AGAGCTATA-AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTC 48292 || || ||| || | || | | | | ||||| ||||| ||| || || || Sbjct 90018 AGGGC-ATAGAACAGGTCGCGTGCACGCAACTCTTCTTTGCCGTGATTTTTTCGTAGGTC 89960 Query 48293 AAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCG 48352 | ||| || | |||||||| ||||| ||||| ||||| || || | ||| || Sbjct 89959 TAAAAACTCAAAAATATCAGCGTGCCAAGGTTCCAAATAAATGGCAAAACTTCCTTTTCT 89900 Query 48353 TTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGAC 48412 | | || ||||| |||| || | || || | | | | | || ||| || || Sbjct 89899 TCTTCCTCCCCCTTGGTCTACGTAGCGAGCGGTCATATCAAAGTTGCGTAGCATGGGTAC 89840 Query 48413 AATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACT 48472 ||| ||||| || | ||||||||||| ||| ||| || | || | |||| | Sbjct 89839 AATGCCATTGGAAACCCCATTGGTTCCTTTAATGTAAGAGCCTGTTGCACGGATATCATG 89780 Query 48473 AATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATC 48532 ||| | || | ||||||||| || || ||| ||||||| |||| | ||||| Sbjct 89779 AATACTTAATCCCACGCCACCTGCCGATTGTGAAATTTTAGCACACTGTTTTAAAGTATC 89720 Query 48533 ATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGG 48592 ||| || || || || ||||| || |||| | | || ||||| || | || || Sbjct 89719 ATAGATGCCATCAATGCTATCTTCCTTCATGGTGAGCAGGAAACAGGAGGATAGCTGTGG 89660 Query 48593 ATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAA 48652 | | ||||||| |||||| | || || | ||||| ||||||| || || || | Sbjct 89659 TTTAGGCGTTCCTGCATTAAAAAGGGTAGGGGTAGCATGTGTAAACCACTTTTCGGAGAG 89600 Query 48653 CAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACG 48712 || | || |||| || | || ||||| || || || |||| | || || Sbjct 89599 CAGGTGGTAGGTTTGGATGGCTGATGTGATATCTTCTTTGTGAATGCCTACGGCCACCCG 89540 Query 48713 CATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTT 48772 ||| | ||||| || |||||||| |||||||| || || || | |||||||| | Sbjct 89539 CATGAGCATATGCTGCGGTCTTTCCACAATTTTACCATGTAGCTTGAGTAGATATGACCT 89480 Query 48773 TTCCAATGTTTTAAAACCAAAATA 48796 ||| || || ||||| ||||| || Sbjct 89479 TTCTAAGGTCTTAAAGCCAAAGTA 89456 >seq332 Length=17232 Score = 320 bits (354), Expect = 2e-82 Identities = 635/927 (69%), Gaps = 17/927 (2%) Strand=Plus/Minus Query 47877 AGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATT 47936 || || || ||||||| |||||| ||||| || |||| || || ||||| | ||| Sbjct 5301 AGAGCAATTGATGCTAAATTACAAACAGCAACTTCATCAGGTGATGTGTATTGGACGATT 5242 Query 47937 TCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATT--ATTNNNNTTGT 47994 |||| ||||| ||||| ||||| || ||||| | |||||| ||||| ||| | Sbjct 5241 TCAGTACATAAATTACTACATTGAATGGTACCGAGATTTTGTTGATTGGATTTAGCAT-- 5184 Query 47995 TACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAG 48054 |||| || || || || | | || || || |||||||| |||||||| |||||||||| Sbjct 5183 TACAAGCATCTTTATATAAAAAGAATGGAGTACCAGTTTCAATCTGAGAGTCAATGATAG 5124 Query 48055 ATTTCCAAACAGTCCT--AGCCTTTATAACAGCTCTAGCTTTATTATCA-TG--TTCGTA 48109 ||| | || || ||| || | |||| | | || | | || ||| || Sbjct 5123 CGAACCAGA--GTTCTTGAGCTTTGACAACACGACGAACTAAACCTGGAGTGGATTCATA 5066 Query 48110 TTTAGTATATAACT-TCTCAAATTCATCCCCATACACATTAT-CTAACCCAGGACATTCA 48167 |||||| | ||| ||||||||| ||||| ||||| | | || || |||| Sbjct 5065 ACGTTCATATAATTGTCT-AAATTCATCTCCATA-ACATTCGGCGAGTCCTGGTGCTTCA 5008 Query 48168 TTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGT 48227 || ||||| | |||||||||||| ||| ||| || | |||||| | ||| | Sbjct 5007 TTGGGACAAAACAATGACCAATCGGCATTGGTTTCAACACGTTCCATAAAGAGATCGGAA 4948 Query 48228 ATCCAAAGAGCTATAAATAA-ATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTT 48286 | ||| || || ||| | || ||| | || | | |||||| || || |||| |||| Sbjct 4947 ACCCAGAGGGC-ATAGAAAAGATCACGAGCACGAATTTCTTCCTTTCCGTGATTCTTTTT 4889 Query 48287 AAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACC 48346 | || | ||| || | ||||| |||||||||||||| ||||| | || | |||| Sbjct 4888 CAAATCCAAAAATTCAAAAATATCTGCATGCCATGGTTCCAAATAAACGGCAAAAGCACC 4829 Query 48347 TGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACAT 48406 | || || || |||||||||| ||| | || |||| ||| | || | | ||| Sbjct 4828 TTTTCTCTTGCCTCCACCTTGATCTACATAACGAGCGGTATCATTAAAGACACGAAGCAT 4769 Query 48407 TGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTAT 48466 ||| || | ||||| || | |||||||| || ||||||||| | | ||| | || Sbjct 4768 TGGAACCAATCCATTGGAAGTTCCATTGGTACCACGAATATAACTACGAGCAGCACGAAT 4709 Query 48467 ATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAG 48526 || || | |||||| |||||||| || || || |||| ||| |||| || Sbjct 4708 CTTGTGAACAGCAATACCAATACCACCAGCAGACTTTGAAATTAAGGCAGTTTGTTTTAG 4649 Query 48527 GGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACAT 48586 |||||| |||||||| || ||||||||||| |||| | || | |||||| |||||| Sbjct 4648 GGTATCGTAAATTCCCTCGATACTATCATCCTTCATTTGTACCAAGAAACAAGAAGACAT 4589 Query 48587 TTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTC 48646 ||| |||| | ||| || | ||| || | ||| |||| |||||| ||||| ||||| Sbjct 4588 TTGAGGATAAGGAGTACCAGCATTGAAAAGTGTAGGAGTAGCATGAGTAAACAATTTCAA 4529 Query 48647 TGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGA 48706 |||||| | ||| || |||||| ||| |||||| ||| ||||| | ||| Sbjct 4528 TGATAATTTATCATAGGTAAGGATAACATTATCAATATCCTCACCATGAATACCCAAAGA 4469 Query 48707 TACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATA 48766 |||||||| ||||||| |||||| | ||| ||||| | ||| ||||| ||||| Sbjct 4468 AACACGCATCAACATATGTTGAGGACGTTCTACAATGATACCATTAATTTTGTGTAGATA 4409 Query 48767 TGATTTTTCCAATGTTTTAAAACCAAA 48793 | ||||||| |||||||||||||| Sbjct 4408 ACTTCTTTCCAAAGTTTTAAAACCAAA 4382 Score = 163 bits (180), Expect = 3e-35 Identities = 330/486 (68%), Gaps = 13/486 (3%) Strand=Plus/Minus Query 46977 TCCACAGTAAACTTAATTGGAT-TACTCGCTGATTTTGTTCGTAAATAATACATACCAGT 47035 || ||||| || | ||||| || ||| || | | | || || | ||| |||||||| || Sbjct 6231 TCGACAGTGAATTGAATTGCATCTACA-GCAGGTCTAGTACGAAGATAGTACATACCGGT 6173 Query 47036 CTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTC 47095 || || ||| |||| ||||||||||||| ||||||||||| | |||||| Sbjct 6172 TTTCAATCCTTTTTTCCAGGCATAGAAATGCATTGAAGTTAATTTAGCAAGTGAAGGTTC 6113 Query 47096 TGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCAT 47155 | ||| || ||||| | |||||| ||||| || ||||||||||| ||||| ||||| Sbjct 6112 AGCAATGAAAACATTAAAACTTTGACTTTGATCTATGAATGCACCTCTTTCAGCAGCCAT 6053 Query 47156 ATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTC 47215 ||| | | | ||| | || ||||| || |||||||| | ||||||| ||||| Sbjct 6052 ATCGATGAGGGAACGTTGACGAATTTCCCAAACGGTTTTATAGAGTTGTTTATATTCTTC 5993 Query 47216 TGGGAGA---TTAGTATTTTGAATAGATCCTCCgttttctataattttgttttttaattc 47272 |||||| | ||||||||| || || || || ||| || | ||||| | ||| Sbjct 5992 GGGGAGACCTGGAATATTTTGAACGGAACCACCATTGGCTACGATCATATTTTTAATTTC 5933 Query 47273 atttgaccaaag----ttttcgttcagttaatgtttttaaAAGATGAGGATTAACAATTT 47328 | ||| || |||| | || | || | | || ||| ||||| Sbjct 5932 CGGAGTCCAGAGACCCAATTCGATGAGAT----CTTGGAGTAATTGTTTATTGACAATGG 5877 Query 47329 GAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATT 47388 |||||| || | || || | ||| ||| ||||| |||||||||||| | | ||| Sbjct 5876 TAAATTCACCGGCGAGAACACGACGAGAATAGATATTGGATGTATATGGTTCGAAACATT 5817 Query 47389 CATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTAT 47448 |||||||||| | ||||| | || || || || ||||| | ||||| | ||| |||| Sbjct 5816 CATTATTTCCGAGGATTTGTGATGTGGAGGCAGTTGGCATTGGTGCAATGAGTAAACTAT 5757 Query 47449 TTCTTA 47454 |||||| Sbjct 5756 TTCTTA 5751 Score = 84.2 bits (92), Expect = 2e-11 Identities = 164/238 (69%), Gaps = 11/238 (5%) Strand=Plus/Minus Query 48932 TGTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAGCATAATCTGGATG 48991 ||||| ||||||||||||| || || || | || || ||||| ||||||||||||| Sbjct 4216 TGTTTGTTTATGAAGATTACTAATTGAAATACGTGCTGCCAATATTCCATAATCTGGATG 4157 Query 48992 AATTGTTGTACATGTA-CTAGATATTTCTGCTGCTAATATATCTAATTCTTTAGTAGTTA 49050 |||||| |||| || || | | ||||||||||| |||| | ||| | || ||| Sbjct 4156 TCTTGTTG-ACATATATGCAGCTGTCTCTGCTGCTAAATTATCAAGTTCCGTTGTCTTTA 4098 Query 49051 CACCTGTATATATTCCTTGAATAACTTTCATTGCTATATTTACTGGATC-----TATATG 49105 | |||| | |||| || || ||||| ||| | | |||||||| ||| || Sbjct 4097 CTCCTGAAAATATACCACTAACTACTTTTTGTGCAACTTCAACTGGATCAACAATATCTG 4038 Query 49106 A--TCCATATCCAGTCCATA--ACATAAtttttttATTCTAGATGTAATTTTATCAAA 49159 | | || | |||||| |||||| | | || | ||||||||||||||||| Sbjct 4037 AATTTAATTTTGGTTCCATATCACATAAATATGAAATACGTGATGTAATTTTATCAAA 3980 >seq1819 Length=3716 Score = 215 bits (238), Expect = 6e-51 Identities = 627/953 (66%), Gaps = 24/953 (3%) Strand=Plus/Plus Query 47886 GATGCTAGATTACATACAGCTACCTCAT--TTGGATTAGTATATTGTATTATTTCAGCAC 47943 || || || ||||||||||| ||||| | ||||| |||||| | ||| ||||| | || Sbjct 1930 GAGGCCAGGTTACATACAGCAACCTCGTCTTTGGA--AGTATACTCTATAATTTCTGTAC 1987 Query 47944 ATAGATTACCACATTTGATAGTACCCAAATTTTGATGATT--ATTNNNNTTGTTACATGC 48001 | || || || |||||| || || |||||||| || || ||| |||| ||| Sbjct 1988 AAAGGTTGGAACTTTTGATGGTTCCTAAATTTTGCTGGTTGGATTTGC--TGTTTGCTGC 2045 Query 48002 GTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCA 48061 || || || | || | |||| ||||| ||||| ||||| || || | || | ||| Sbjct 2046 ATCTTTATACAACAGATAAGGGGTTCCGGTTTCAATCTGTGAATCCAGAATGGCAAACCA 2105 Query 48062 AACAGTCCTAGCCTTTATAACAGCTCTA---GCTTTATTATCATGTTCGTATTTAGTATA 48118 || || | ||||| | | | || || || | |||||| ||| Sbjct 2106 AAGC-TCTTGTGCTTTA--ATGGTTTTACGGGCACGTCCTTCTTTTTCGTAACGCTCATA 2162 Query 48119 TAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACAT 48178 ||| || ||||| | ||| | || | | || || ||||| |||||| | Sbjct 2163 TAAAGCATCGAATTCTGCACCAAAGCAATCTGCCAGTCCCGGGGCTTCATGAGGACAGAA 2222 Query 48179 CAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGC 48238 || ||| || | | | || ||| || |||| || | || || |||||| || Sbjct 2223 TAAACTCCAGTCTCCGTTTTCTTCTACCCTTCTCATGAACAGGTCACATACCCAAAGGGC 2282 Query 48239 TATA-AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTA---AGTTCAA 48294 ||| |||||||| || | | |||||||| || ||| || |||| || || | Sbjct 2283 -ATAGAATAAATCTCTGGCACGAAGTTCTTCTTTACCATGGTT---TTTACGCAGGTCCA 2338 Query 48295 GAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTT 48354 |||| || | ||| ||||||||||| || | || || || | ||||| |||| Sbjct 2339 GAAAACTCAGCACATCTGCATGCCATGGCTCCAGGTAAATGGCAAAAGCACCTTTACGTT 2398 Query 48355 TATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAA 48414 || || || || || | ||| | ||| |||| |||| | ||| | ||||| || |||| Sbjct 2399 TACCTCCACCCTGGTCCACATAACGGGCGGTATCGTTAAATACTTTCAACATAGGTACAA 2458 Query 48415 TACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAA 48474 | ||||| | || || ||||| ||||||| ||| | || | || ||| | Sbjct 2459 TCCCATTGCTGGTCCCGTTTGTTCCACCAATATAAGATCCCGTGGCACGGATGTTATGGA 2518 Query 48475 TTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCAT 48534 | | ||| ||||||||||| ||| || ||| ||| |||| | ||||| | Sbjct 2519 TGCTTAAACCAATACCACCTGCGCTTTGTGAAATTTTAGCGGTTTGTTTTAAAGTATCGT 2578 Query 48535 AAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGAT 48594 |||||||||| ||||| || || ||| | | || ||| || ||||||||| || | Sbjct 2579 AAATTCCTTCAATACTGTCGTCCTGCATGGTCAGTAAAAAGCAGGAAGACATTTGAGGTT 2638 Query 48595 GACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACA 48654 | || ||| ||||||||| ||||| | |||||| ||||||| ||| | || Sbjct 2639 TAGGGGTAGCTGCATTAAATAAAGTTGGGGTTGCATGCGTAAACCAGCGCTCACTCATCA 2698 Query 48655 ATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCA 48714 ||||| ||| |||| || || ||||| || || || |||| | ||||||| Sbjct 2699 GGTTATACGTTGCAATCGCACTTTCAATATCTTCTTTGTGAATCCCTACGGCAACACGCA 2758 Query 48715 TTAACATATATTGAGGTCTTTCAACAATTTTGTTATT-TATTTTCAAAAGATATGATTTT 48773 | |||| || ||| || | ||| |||| ||||| || |||||||| ||||| |||||| Sbjct 2759 TAAACAAATGTTGCGGGCGTTCTACAA-TTTGTCCTTCTATTTTCAGCAGATAGGATTTT 2817 Query 48774 TCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAAT 48826 || | |||||||| |||||||| | | || ||| || | |||| |||||| Sbjct 2818 TCAAGGGTTTTAAACCCAAAATAATCGAATCCAAAATCCCTGTCATAAATAAT 2870 Score = 107 bits (118), Expect = 2e-18 Identities = 223/324 (69%), Gaps = 11/324 (3%) Strand=Plus/Plus Query 18584 TATATTTTAGTTGATTGTTATGTTATGGTTAAAAATCAACATCCAAAGAAAAAG---AA- 18639 |||| |||||| | || || | | | |||||||||| |||||| || || | || Sbjct 3355 TATACTTTAGT-GTTTCTTTGGCTGGGCTTAAAAATCATCATCCAGGGAGAAGGCCGAAG 3413 Query 18640 --TTCTCTTCATTAGAATTCATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAA 18697 || ||||| |||| ||| || || |||||||||| || | || | ||| |||| Sbjct 3414 CTTTATCTTCCGTAGAGGTCAACACCCCGCTTTTTTGATAATCACCCACACGTTTCTCAA 3473 Query 18698 AGAAATTAGTTTTTCCCTCTAATGATATACAT-TCCATAAAATCAAATGGATTTTTTACA 18756 ||||||| ||||| || | | || || ||| |||||||||||||| ||||| | || Sbjct 3474 AGAAATTGGTTTTGCCTTGCAGGGAGAT-CATCTCCATAAAATCAAACGGATTGGTGGCA 3532 Query 18757 TTATATAtttttttGAATCCTAATTCTAATAGTAGTCTATCCGCTACAAATTTAATATA- 18815 | ||||||||| | | || | ||| || ||| || || ||||| | |||||| Sbjct 3533 TGATATATTTTGGTATAACCCAGTTCCTGCAGCCATCTGTCTGCAACAAACTCAATATAC 3592 Query 18816 TGTGTTCATCATATCACAATTCATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAA 18875 |||| ||||| | |||||| || || | ||| || | |||||||||| ||| Sbjct 3593 TGTG-ACATCAGTTTTGCATTCATCCCGATCAGGGCAACCGGCAAGGCATCTGTAATAAA 3651 Query 18876 TTCTTGTTCTATATTTACTGCCTC 18899 ||| | ||| || | ||| || || Sbjct 3652 TTCCTTTTCGATTTCTACCGCGTC 3675 >seq222 Length=228455 Score = 206 bits (228), Expect = 3e-48 Identities = 225/297 (76%), Gaps = 5/297 (2%) Strand=Plus/Plus Query 18958 AAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTT 19017 ||||| ||||||| |||||||| || || || | ||| || | |||||| ||||| || Sbjct 135070 AAACAGGCAAAATTACAATGTAAACCTTCATCACGACTGATAAGTTCATTGGAAAAAGTC 135129 Query 19018 AAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAG 19077 || || ||||||| |||||| ||||| |||||||| || ||| ||| ||| |||| Sbjct 135130 AATCCTGGCATCAATCCTCTCTTTTTCAACCAGAAAATCGAACAAAAACTGCCACTAAAG 135189 Query 19078 AATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTA 19137 |||||||||||||| ||||||||||| || | | ||| || || || | | | Sbjct 135190 AATATACCTTCTACGGCTGCAAAAGCTACCAAACGTTCAGCAAAA----GATTTTGAATT 135245 Query 19138 TG-AATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGA 19196 || ||||||| ||| |||||||||||| ||||| ||||||||||| ||||| || |||| Sbjct 135246 TGTAATCCATCTCAATGCCCAATCAGCTTTCTTCTTTACACATGGAATTGTTTCAATAGC 135305 Query 19197 ATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACT 19253 ||||||||| | ||||||| || ||||| ||||| ||| || |||||||| Sbjct 135306 ATTAAATAGTCTAGTTTTTTCATCTGGATTTTTAATATATGTATCGATTAATAAACT 135362 Score = 196 bits (216), Expect = 5e-45 Identities = 236/318 (74%), Gaps = 5/318 (2%) Strand=Plus/Plus Query 19261 TCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATC 19320 || |||||||||||||| || || || ||||| || || ||||| | ||||||| || Sbjct 135460 TCGGAATGAATATTTTCAATTGCAATTTGAAAACCATAGAAACAACGAGCTTCTGGAATT 135519 Query 19321 TGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCA 19380 || |||||||| ||| | | | |||||||||||||| || || ||||| |||||| Sbjct 135520 TGAACTTCACTCATGAATTTGGTGGCTAAATTTTCATTAACGATACCGTCACTGGCTGCA 135579 Query 19381 AAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATT---CCAA 19437 || || |||| ||||| ||||||||| |||||| | ||||| |||| |||| Sbjct 135580 AAGAAAGCTAGAACATGAGAGATAAAATGTCTTTCATTATCGTTTAATTTATTCTCCCAA 135639 Query 19438 TCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTT 19497 |||| ||||| || | | ||| | ||| || |||||||||| ||||| || || || Sbjct 135640 TCATAGATATCATTTGCAAGATCGATTTCCTCTGCTGTCCAAAATGAAGCTTCAGCATTC 135699 Query 19498 TTAT-ACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATT 19556 || | | ||| ||| ||||||| ||||| || || |||| |||||||||| |||||| Sbjct 135700 TTGTAATATG-CCCAAATATCACTATATTTAATTGGGAATAATACAAATCTATCTTTATT 135758 Query 19557 TTCTTTAAGAATAGGTTC 19574 ||||| | ||| ||||| Sbjct 135759 CTCTTTTAAAATTGGTTC 135776 >seq202 Length=37231 Score = 86.0 bits (94), Expect = 7e-12 Identities = 171/248 (69%), Gaps = 8/248 (3%) Strand=Plus/Minus Query 65903 GTGAAAATATGGCAAATAAAGGAAAAATAGTGATAGTTGCAGCATTGGATGGAACATTTA 65962 ||||| | | || ||| |||||||| | || || | ||||||||||||||||||| Sbjct 3635 GTGAAGAATTAGCTAATCAAGGAAAAGTTGTAATTATATCAGCATTGGATGGAACATTCC 3576 Query 65963 AAAGAAAACCTTTTGGTAATGTATTA---AATTTAATTCCATTATCTGAAACAGTAACAA 66019 |||||||||| ||| || || | |||| | ||| | | ||||| | || | Sbjct 3575 AAAGAAAACC--ATGGCCATCAATGATCGAATTGATTTCGA-AAGCTGAAGATATTACGA 3519 Query 66020 AACTTACAGCTGTGTGTATGAAATGTTTTAAAGATGCATCTTTTTCAAAACGTATAGGTA 66079 || | | || || |||||| |||| | |||||| | || || |||||||| | | Sbjct 3518 AATTAAATGCCGTCTGTATGGTCTGTTATCAAGATGGTGCATTCTCTAAACGTATCGTTC 3459 Query 66080 CAGA-AACAGAGATAGAAATTATAGGCGGTAAAGATAAATATCTATCTGTATGTAGGAAG 66138 |||| ||| | | ||| | || || ||| ||||||||| |||| || ||||| || Sbjct 3458 CAGATGACACTG-TTGAATTAATTGGTGGTTCTGATAAATATATATCAGTTTGTAGAAAT 3400 Query 66139 TGTTATAA 66146 || ||||| Sbjct 3399 TGCTATAA 3392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562054177077360