Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq386 96.9 1e-15 >seq386 Length=121086 Score = 96.9 bits (106), Expect = 1e-15 Identities = 133/185 (72%), Gaps = 6/185 (3%) Strand=Plus/Minus Query 24820 ACGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGT 24879 |||||||||| ||||||||||||||||||| ||| || | || ||||||||||||| Sbjct 3348 ACGGAAAGCTTTCCTGCCAGCTCTACCAGCGCTCCGCCGATATCTTTCTCGGCGTGCCGT 3289 Query 24880 TCAATATCGCGAGCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTC---GGACTGA 24936 |||||||||| ||| || |||||||||| || | | || ||| || || ||| Sbjct 3288 TCAATATCGCATCCTATGCCCTGCTGACCC---TCATGGTGGCGCAGGTCACGGGTCTGC 3232 Query 24937 AGGTCGGCGAATTCATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGC 24996 || || || ||| | || ||||| | || || ||| | ||||| |||||| Sbjct 3231 AGCCGGGTGATTTCGTTCACACGCTGGGCGATGCGCATCTCTATGCCAACCATTTCGAGC 3172 Query 24997 AGGCG 25001 ||||| Sbjct 3171 AGGCG 3167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164157644182752