Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_016770.1 Length=47159 Score E Sequences producing significant alignments: (Bits) Value seq3281 102 2e-17 >seq3281 Length=2714 Score = 102 bits (112), Expect = 2e-17 Identities = 153/213 (72%), Gaps = 11/213 (5%) Strand=Plus/Minus Query 3446 CCGCAAACCTGCGCTACCAT---AGACAGCAAGATAGAATAAGACGCAATGTTGAAAGGA 3502 ||||||||||| || ||||| || ||| ||| | ||| || |||||||| ||||| Sbjct 2175 CCGCAAACCTGTGCAACCATCATAGTCAGTAAG---GCATAGGAGGCAATGTTAAAAGGT 2119 Query 3503 ACGCCTAAAAATAGGTCTGCACTTCTTTGATACAGTTTCAAATCCAAATAACCGGACTCA 3562 || || | ||| | |||||||||| ||||| || | | || | ||| ||| Sbjct 2118 ACCCCCAGAAAAATATCTGCACTTCGCTGATAAAGCTGACAGCTCAGTTTTCCG---TCA 2062 Query 3563 GACACATAGAACTGAAAAAAGCAGTGGCACGGAGGAAGTGCCATCATG-TGTATTTCTCC 3621 | ||||| ||||| |||||| ||||| || ||||||||||| ||| | ||| ||| | Sbjct 2061 GCTACATAAAACTGGAAAAAGGCATGGCAGGGTGGAAGTGCCAT-ATGTTCTATCTCTGC 2003 Query 3622 AACATTCCAAGCACTAACAATTAACCTTCTTGA 3654 |||||||| ||| ||||| | |||||| || Sbjct 2002 CACATTCCAGGCAGACACAATAATCCTTCTGGA 1970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150773279891148