Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_017984.1 Length=46387 Score E Sequences producing significant alignments: (Bits) Value seq3418 84.2 6e-12 >seq3418 Length=564 Score = 84.2 bits (92), Expect = 6e-12 Identities = 138/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 41831 ATAAGCGCCCAATGATGAGTGATTTGCGTGAATCTGGCCAAATCGAACAAGATGCCAATA 41890 |||| || || ||||| || ||||||||||| || ||||| || |||||| | Sbjct 332 ATAAACGTCCGGTGATGTCCGACTTGCGTGAATCCGGTGCGATCGAGCAGGATGCCGACT 391 Query 41891 CGATTTTATTTATTTATCGTGATGAGGTTTACAACAAACAAAGTAAAGATATTGGGATTG 41950 ||| | |||||||| || ||||||||||| ||||| || |||||| ||| | || Sbjct 392 TGATCATGTTTATTTACCGGGATGAGGTTTATAACAAGGAATCTAAAGAAGCTGGCACTG 451 Query 41951 CTGAAATTATTGCAGCTAAAGTCCGTGATGGTGAAGTTGGCACGGTTCGATTAGCTTCTG 42010 | ||||||||| | ||| ||| ||||| | |||| || || || | || | | Sbjct 452 CCGAAATTATTATCGGCAAACAGCGTAATGGTCCAATTGGTACCGTACGTCTGGCATTCG 511 Query 42011 AGCTTCAATATAGCCGTTT 42029 | |||||||| ||| || Sbjct 512 AAGGTCAATATACCCGCTT 530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148303107949212