Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_019444.1 Length=176043 Score E Sequences producing significant alignments: (Bits) Value seq3307 91.5 2e-13 >seq3307 Length=6577 Score = 91.5 bits (100), Expect = 2e-13 Identities = 76/91 (84%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 19135 CAATCCTCTATAGCTCAGTTGGTAGAGCAGGTGACTGTTAATCACCCTGTCCCTGGTTCG 19194 || ||| | |||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 1777 CATTCCGCGATAGCTCAGTTGGTAGAGCAAATGACTGTTAATCATTGGGTCCCTGGTTCG 1718 Query 19195 AGTCCAG---GTGGAG-GAGTTAGTAAAAAA 19221 ||||||| |||||| || |||||||||| Sbjct 1717 AGTCCAGGTCGTGGAGCCAGATAGTAAAAAA 1687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563154870107120