Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_019519.1 Length=69391 Score E Sequences producing significant alignments: (Bits) Value seq82 158 5e-34 >seq82 Length=463168 Score = 158 bits (174), Expect = 5e-34 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 11698 CATGCCGAGTGCTGCCATGTACGTTTCGAGAATTGTTTCTTCTTCAAGGCGCTCATTCGC 11757 ||||||||| || ||||||| ||||| || | ||| ||||| |||||| ||||| Sbjct 393126 CATGCCGAGGGCGTTCATGTACAGCTCGAGGATCGCTTCCTCTTCCTTGCGCTCGTTCGC 393067 Query 11758 ATCTTTTTTACGAATGCCGATGATTTTGCGAATCGCCTTGGTATCGTAGCCGCGACCCTT 11817 ||| || || || | || || ||| |||| || |||||| ||||||||||| ||||| Sbjct 393066 ATCCTTCTTGCGCAGGCGGACGATCGTGCGGATGATCTTGGTGTCGTAGCCGCGGCCCTT 393007 Query 11818 GGCTTCACTCATGACGTCTTTGATATCGCCCTGAATAGCTGCTTTTTCTTCTTCAAGGCG 11877 |||||| ||| || || ||||| ||| |||||| | | |||||||| |||||||| Sbjct 393006 GGCTTCCGCCATCACTTCCTTGATGTCGTCCTGAAGCGTGGTCTTTTCTTCCTCAAGGCG 392947 Query 11878 CTCGACGCGCTCAATGAATTGACGGAGTTCCGCTGCGGCTAC 11919 ||||| |||||| ||||| || || | |||||| || || || Sbjct 392946 CTCGATGCGCTCGATGAACTGCCGCAATTCCGCAGCCGCAAC 392905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 221905373444528