Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_019527.1 Length=43551 Score E Sequences producing significant alignments: (Bits) Value seq915 93.3 1e-14 >seq915 Length=38681 Score = 93.3 bits (102), Expect = 1e-14 Identities = 97/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 18794 CGACTGGTCGAGATTGACCAAATGGACGTGCTGGACATCCTGAAAGAGGATGGGGCACTC 18853 || ||||| || |||||||| |||||||||||||| |||||||| || || || | | Sbjct 12244 CGCCTGGTTGAAATTGACCAGATGGACGTGCTGGATATCCTGAACGACGACGGCGGGATG 12303 Query 18854 AAGCCGATCAGCGAGTGGCC-AAAGTGCTGGCGAACCACATTGAGCGGGCTGGACATCAA 18912 ||||||||| || ||||| ||||| |||||| ||| || | |||| | |||| ||| Sbjct 12304 AAGCCGATCGCTGAATGGCCGAAAGT-CTGGCGTACCTCACTAAGCGCGATGGATATCGC 12362 Query 18913 TACCA 18917 ||||| Sbjct 12363 TACCA 12367 Score = 82.4 bits (90), Expect = 2e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 18953 ATCCTCAAGAAGATCAAGTGGCCGGACAAGGTGAAGAACCTAGAGCTTATCGGCAAGCAT 19012 ||||| |||||| | |||||||||||||||||||||||||| || || || || ||||| Sbjct 12439 ATCCTGAAGAAGGTAAAGTGGCCGGACAAGGTGAAGAACCTCGAACTGATTGGTAAGCAC 12498 Query 19013 GTCCGCGTCGGGGCATTCAAAGAGC 19037 ||| ||| || |||||||||| Sbjct 12499 GTCGACGTTAACGCGTTCAAAGAGC 12523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139228745737644