Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_019917.1 Length=62952 Score E Sequences producing significant alignments: (Bits) Value seq7157 102 3e-17 >seq7157 Length=721 Score = 102 bits (112), Expect = 3e-17 Identities = 214/311 (69%), Gaps = 11/311 (4%) Strand=Plus/Minus Query 9704 CGTCAACAAAGTCATCCTCGTCGGCAATCTCGGTGCCGACCCGGAAACCCGCTATCTCCC 9763 |||||||||||| || ||||||||||| ||| | |||||||||| |||||| ||| Sbjct 385 CGTCAACAAAGTGATTCTCGTCGGCAACGCCGGCGGCGACCCGGAAGTCCGCTACACCCC 326 Query 9764 GAGCGGCGACGCAATCTCCAACATCCGCCTCGCGACGACCGATCGTTACAAGGACAAAGC 9823 || |||| |||| | | ||||| ||| || || | ||| | | || || || Sbjct 325 GAACGGCAACGCCGTAACGAACATAACCCTGGCCACCAGCGAAAGCTGGAAAGATAAGCA 266 Query 9824 CAGCGGCGACTTCA-AAGAAGTG-ACCGAGTGGCACCGCGTCGCCTTCTTCGGCCGCCTC 9881 | |||| | || || || | ||||||||||||||||| | ||||||||| || Sbjct 265 GACCGGC--CAGCAGCAGGAGCGTACCGAGTGGCACCGCGTAGTGTTCTTCGGCAAGATC 208 Query 9882 GCCGAGATCGTCGACGAGCACCTGCG-CAAGGGCGCATCGGT-CTACATCGAGGGGCGCA 9939 ||||| |||| | ||| | ||||| ||||| || | || |||| |||| || Sbjct 207 GCCGAAATCGCGGGTGAGTATCTGCGAAAAGGGAGC--CAGTGCTACGTCGAAGGCACTC 150 Query 9940 TCAAAACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGAGATCGTCG 9999 || || || |||| ||| || ||| | | |||||||| ||||||||||||| Sbjct 149 TCCGCACCCGCGAGTG---GGAAAAAGACGGAGTGAAACGCTACACCACCGAGATCGTCG 93 Query 10000 CCGACAAGATG 10010 |||| || || Sbjct 92 TCGACCAGGTG 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201302525659182