Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_020850.1 Length=38374 Score E Sequences producing significant alignments: (Bits) Value seq3178 98.7 2e-16 >seq3178 Length=10189 Score = 98.7 bits (108), Expect = 2e-16 Identities = 158/225 (70%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 30892 TGAAAAAGCTCGTGCTCTACCAGTGAGCAAAATTCAACATTTGAGCAATGATTGCAGTAT 30951 ||| ||||||||||||| | || | ||| || |||| | ||| || |||||| Sbjct 1007 TGATAAAGCTCGTGCTCGATCAAGGCGCAGAACTCAAGGTCGCTGCACTGGGCGCAGTAG 948 Query 30952 TCGGCGGATAGGGTAATTATAAACTTCGGAACGTAGCCAAACCATTCAAACACTTGTTGT 31011 ||||| | |||||||| || || ||| || | ||| ||||| ||| || ||||| Sbjct 947 TCGGCAGCCAGGGTAATGATGAATGCCGGCACATCGCCGAACCAATCACGCATCTGTTGC 888 Query 31012 TCCATTCTGGCTTTTTTCCATCCACCAGCCATAAACGAAACTTGCTCGGCTTGACCTAAA 31071 ||||| ||||||| | ||| || || || ||||| ||||||||||| || || || Sbjct 887 TCCATCATGGCTTTCTGCCAACCGCCGGCGCGAAACGCTACTTGCTCGGCCTGGCCCAAG 828 Query 31072 ACGACGCGGCCTTGCTTTTCGAATGAGTCG--GAAGCCCACATGA 31114 || ||| || ||||| |||| ||| || |||||||||| Sbjct 827 ACTGTGCGACCCTGCTTGGCGAA--GCTCGACGACGCCCACATGA 785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122663875085568