Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq540 149 1e-30 seq322 149 1e-30 seq54 147 4e-30 seq982 140 6e-28 seq222 129 1e-24 seq391 107 4e-18 >seq540 Length=89862 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| || | | |||||||| | ||| | || || ||| ||||||||| Sbjct 84316 ATACCACCTCTGAGTCTGAGAACTAAATGGAGAGTTGATTCCTTTTGGATGTTATAATCA 84257 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||||||||||||| |||||||| | ||| ||||| || ||| Sbjct 84256 GAGAGGGTACGGCCATCTTCCAATTGTTTACCGGCAAAGATAAGTCTTTGTTGGTCGGGT 84197 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| ||||| | || ||||| || | || || ||| Sbjct 84196 GGGATACCTTCTTTATCTTGGATTTTGGTCTTGACATTTTCAATGGTGTCAGAACCTTCA 84137 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| || || |||||||| || || || |||| ||| || ||||| Sbjct 84136 ACTTCTAATGTGATAGTTTTACCGGTCAAGGTCTTAACAAAGATTTGCAT 84087 Score = 147 bits (162), Expect = 4e-30 Identities = 173/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | | ||| ||||| | || | || || ||| ||||||||| Sbjct 83860 ATACCACCTCTTAATCTAAGTACCAAATGGAGGGTTGATTCCTTTTGGATGTTATAATCA 83801 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||||||||||||| |||||||||| ||| ||||| || ||| Sbjct 83800 GAGAGGGTACGACCATCTTCCAATTGTTTACCGGCAAAGATTAGTCTTTGTTGGTCGGGT 83741 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| ||||| | || ||||| || | || || ||| Sbjct 83740 GGGATACCTTCTTTATCTTGGATTTTGGTCTTGACATTTTCAATGGTGTCAGAACCTTCA 83681 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTA 192540 ||||||| || || ||||| || ||||| || || | ||| || ||||||||| Sbjct 83680 ACTTCTAATGTGATAGTTTTTCCGGTTAAAGTCTTTACAAAAATTTGCATTTTA 83627 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||||||| | | |||||||| | || | ||||| ||| ||||||||| Sbjct 84088 ATACCACCTCTAAGTCTGAGGACTAAATGAAGGGTTGATTCTTTTTGGATGTTATAATCA 84029 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||||||||||||| ||||| || | ||| |||||||| ||| Sbjct 84028 GAGAGGGTACGACCATCTTCCAATTGTTTACCGGCAAAAATAAGTCTTTGTTGATCGGGT 83969 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| || || | || || || || | || || || Sbjct 83968 GGGATACCTTCTTTATCTTGGATCTTGGTCTTGACGTTTTCAATGGTGTCAGAGCCCTCA 83909 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| || || |||||||| || || ||||||| ||| || ||||| Sbjct 83908 ACTTCTAATGTGATTGTTTTACCGGTCAAGGTTTTAACAAAAATTTGCAT 83859 Score = 143 bits (158), Expect = 5e-29 Identities = 178/243 (73%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 192294 TTTTAGTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGA 192353 ||| | |||||| |||||||||| | | | || | ||| | || | ||||| Sbjct 84555 TTTAATTTTAAT--TACCACCTCTTAATCTAAGAACGAGATGGAGGGTTGATTCTTTTTG 84498 Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| || |||||||| | || || |||| |||||||||||||| ||||| || | ||| Sbjct 84497 GATGTTGTAATCAGAGAGGGTACGACCATCTTCCAATTGTTTACCGGCAAAAATAAGTCT 84438 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 |||||||| ||||| || |||||||||||||| ||||| | || ||||| || | Sbjct 84437 TTGTTGATCGGGTGGGATACCTTCTTTATCTTGGATTTTGGTCTTGACATTTTCAATGGT 84378 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || ||| ||||||| || ||||||||||| || || ||||||| ||| || || Sbjct 84377 GTCAGAACCTTCAACTTCTAATGTGATGGTTTTACCGGTCAAGGTTTTAACAAAAATTTG 84318 Query 192534 CAT 192536 ||| Sbjct 84317 CAT 84315 >seq322 Length=112280 Score = 149 bits (164), Expect = 1e-30 Identities = 180/244 (74%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| ||||| | ||| | ||||||||| | |||| ||||| ||| || || ||| Sbjct 11234 ATACCTCCTCTTAAACGGAGTACTAAATGAAGGGTAGATTCTTTTTGGATGTTGTAGTCA 11175 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || ||||||||||||||||| || | ||| ||||| || ||| Sbjct 11174 GAGAGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATAAGTCTTTGTTGGTCGGGT 11115 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| ||||| | || ||||| || | ||| || ||| Sbjct 11114 GGGATACCTTCTTTGTCTTGGATTTTGGTCTTGACATTTTCAATGGTATCAGAACCTTCA 11055 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT--TTTATTAG 192544 ||||||| ||||| |||||||| || || || || | ||| || ||||| | ||||| Sbjct 11054 ACTTCTAAGGTAATAGTTTTACCGGTCAAGGTCTTTACAAAGATTTGCATTATGTATTAA 10995 Query 192545 AAAA 192548 |||| Sbjct 10994 AAAA 10991 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||||||| | | |||||||| | ||||| ||||| ||| || || ||| Sbjct 11690 ATACCACCTCTAAGTCTGAGAACTAAATGGAGAGTAGATTCTTTTTGGATGTTGTAGTCA 11631 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || | || || ||||||||||||||||| || | ||| ||||| || ||| Sbjct 11630 GAGAGGGTACGACCGTCTTCTAATTGTTTACCAGCAAAAATGAGTCTTTGTTGGTCGGGT 11571 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| || || | |||||||| || | ||| || ||| Sbjct 11570 GGGATACCTTCTTTGTCTTGGATCTTGGTCTTTACATTCTCAATGGTATCAGAACCTTCA 11511 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| ||||| |||||||| || || || || | ||| || ||||| Sbjct 11510 ACTTCTAAGGTAATAGTTTTACCGGTCAAGGTCTTTACAAAGATTTGCAT 11461 Score = 141 bits (156), Expect = 2e-28 Identities = 213/298 (71%), Gaps = 10/298 (3%) Strand=Plus/Minus Query 192239 atatattgctatattagagatatattatgataaattaatagatatagagtataCTTTTTA 192298 ||||||| | || |||||| | || ||||| ||| | | || ||| | ||||| Sbjct 12204 ATATATT---AAATGAGAGATCAAATAATATAAAATAAAA---AGAG-GTAACCATTTTA 12152 Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358 |||||| | ||||||||||| | | |||||||| | ||| | ||||| ||| | Sbjct 12151 -TTTAAT--TTCCACCTCTAAGTCTGAGGACTAAATGGAGAGTTGATTCTTTTTGGATGT 12095 Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418 | || ||||| | || || |||| |||||||| ||||||||||| || | ||| |||| Sbjct 12094 TGTAGTCAGAGAGGGTACGACCATCTTCCAATTGCTTACCAGCAAAAATAAGTCTTTGTT 12035 Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478 |||| ||||| || ||||| |||||||| || || | || ||||| || | || | Sbjct 12034 GATCGGGTGGGATACCTTCCTTATCTTGGATCTTGGTCTTGACATTTTCAATGGTGTCAG 11975 Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 | ||| ||||||| ||||| |||||||| || || || || | ||| || ||||| Sbjct 11974 AGCCTTCAACTTCTAAGGTAATAGTTTTACCGGTCAAGGTCTTGACAAAAATTTGCAT 11917 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | || | | |||||||| | ||| | ||||| ||| || || || Sbjct 11462 ATACCACCACGGAGTCTGAGGACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCG 11403 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 ||||| || || |||| |||||||||||||||||||| || | ||| |||||||| ||| Sbjct 11402 GATAAAGTACGACCATCTTCCAATTGTTTACCAGCAAAAATAAGTCTTTGTTGATCGGGT 11343 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| ||||| |||| || || || | || || ||| Sbjct 11342 GGGATACCTTCTTTGTCTTGGATTTTGGTTTTAACGTTTTCGATGGTGTCAGAACCTTCA 11283 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| ||||| |||||||| || || || || | ||| || ||||| Sbjct 11282 ACTTCTAAGGTAATAGTTTTACCGGTCAAGGTCTTGACAAAAATTTGCAT 11233 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | | ||| ||||| | || | ||||| ||| || || ||| Sbjct 11918 ATACCACCTCTTAATCTAAGTACCAAATGGAGTGTTGATTCTTTTTGGATGTTGTAGTCA 11859 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || ||||||||||||||||| || | ||| |||||||| ||| Sbjct 11858 GAGAGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATGAGTCTTTGTTGATCGGGT 11799 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| ||||| | || || || || | ||| || |||| Sbjct 11798 GGGATACCTTCTTTGTCTTGGATTTTGGTCTTGACGTTTTCAATGGTATCAGAACCTTCT 11739 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || || |||||||| || || || || | ||| || ||||| Sbjct 11738 ACTTCCAAGGTGATTGTTTTACCGGTCAAGGTCTTTACAAAGATTTGCAT 11689 >seq54 Length=99412 Score = 147 bits (162), Expect = 4e-30 Identities = 515/805 (64%), Gaps = 14/805 (2%) Strand=Plus/Minus Query 49638 AATACATATAATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTC 49697 ||| || |||||| | ||| || ||||| || | || ||| ||| || || |||| Sbjct 88806 AATTCAAGTAATAACCGATCAGCGACAAACTCGATGTACTGTTTCATCAAGTCGGCATTC 88747 Query 49698 ATACCCAATAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagct 49757 || || | | |||| |||||||||||| | |||||| | ||| ||| |||| || Sbjct 88746 ATGCCAATGAGCTTAACAGGTAATGCATCAGTGACAAATTCCTGTTCAATTGCTACTGCA 88687 Query 49758 tgtttaattatcataattatattattttttgataatttatatttaatatgattcgcatat 49817 | |||| || ||| | | || || | || || ||| | || || | ||| Sbjct 88686 TCGGTAATAATTTCTTTTACCCTTTCTTGTGGAAGTTGATTTTTTAAGTGCTTGGTATAC 88627 Query 49818 attaaACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAA 49877 | || || ||||| ||| ||| || || ||||||||||| || | ||| || | || Sbjct 88626 AATAGGCAAGCAAAGTCACAATGCAATCCTTCGTCCCTAGAAATGAGTTCGTTGG-AGAA 88568 Query 49878 GTTAAT-CCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAA-CTACTAG 49935 | ||| || ||||||||||| || ||||| ||||| || || || |||||| |||| || Sbjct 88567 GCTAAGACCGGGCATTAATCCCCTTTTTTTGAGCCAGAAGATCGA-GCAAAAGCTACCAG 88509 Query 49936 AAAAGAATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTAT 49995 | ||||| || || || ||| ||||| || || | |||| | |||| | || | Sbjct 88508 AGAAGAAAATGCCTTCTACAGCTGCAAAGGCAATGAGTCTTTCAGCAAAACTCGCTTGGT 88449 Query 49996 CATCTAATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTA 50055 | ||||||| || |||||| ||||||||||| || | | | | | || | Sbjct 88448 C------TATCCAACGTAAAGCCCATTCTGCTTTTTTCTTAACACAGTCGAGGGTGTCGA 88395 Query 50056 TAGCTTTAAATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAG 50115 | || || || | |||| |||| | || | | | Sbjct 88394 TGGCATTGAAAAGGCGATTTCTTTCTTGAGGATCCTTAATGTAGGTATCAATGAGGAGTG 88335 Query 50116 AATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTT 50175 |||| |||| ||||| | | || | ||| || || || |||||| | | || | Sbjct 88334 AATAGGTTTCTGAATGGATATTCTCTACAGCAATCTGGAAGCCATAAAAGAATTTGGCCT 88275 Query 50176 CTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAG 50235 ||| |||||| ||||| | | || ||| ||||||| ||| |||||||| ||| Sbjct 88274 CTGTATACTGTACTTCAGCTACAAAGTTTTCTGCTAAATTTTCATTAACAATACCGTCAC 88215 Query 50236 ATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAAATTTT 50295 ||||| ||||| || || |||| ||||| ||| ||||| | || || Sbjct 88214 TAGCTGCAAAGAAAGCCAATACGTGAGAGATAAAGTGTCGTTCATCGTTATTCAAGCGGG 88155 Query 50296 CCCAAGATTCAAGATCGTTTGA--TAAATCTACTTCTTCTATTGTCCAAAATGATGCTAC 50353 |||| || || || |||| ||| || | || || |||||||| ||| | Sbjct 88154 CCCAGTCTTTGAGGTC--TTGACTTAAGTCAATCTCCTCAGCGGTCCAAAAGCTAGCTTC 88097 Query 50354 GGATTTTTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACATATCGTTT 50413 | ||| ||||| | | |||||||| |||||| || || |||| |||| |||| || Sbjct 88096 TGCTTTCTTATAAAAGTTCCATATATCATGATGTTCGATAGGGAATAATACAAATCGATT 88037 Query 50414 AGTAtttttttCTAATATCGGTTCT 50438 |||||| || ||| || || ||| Sbjct 88036 TTTATTTTCTTGTAAAATAGGCTCT 88012 >seq982 Length=41121 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||||||||| | | |||||||| | ||||| ||||| ||| || |||||||| Sbjct 1912 CCACCTCTAAGTCTGAGGACTAAATGGAGAGTAGATTCTTTTTGGATGTTGTAATCAGAG 1971 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | || || |||| ||||||||||||||||| || || | ||| |||||||| ||||| Sbjct 1972 AGGGTACGACCATCTTCCAATTGTTTACCAGCGAAAATAAGTCTTTGTTGATCGGGTGGG 2031 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || |||||||| ||||| || || | || || || || | ||||| |||||| Sbjct 2032 ATACCTTCTTTGTCTTGGATCTTGGTCTTGACGTTTTCAATGGTGTCTGAACCTTCTACC 2091 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||| || || |||||||| || || || || | ||| || ||||| Sbjct 2092 TCTAAGGTGATAGTTTTACCGGTCAAGGTCTTGACAAAAATTTGCAT 2138 Score = 132 bits (146), Expect = 9e-26 Identities = 169/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||||||| | | |||||||| | ||| | ||||| ||| || || || Sbjct 2593 ATACCACCTCTAAGTCTGAGGACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCG 2652 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 ||||| || || |||| || ||||||||||| || || || | ||| |||||||||||| Sbjct 2653 GATAAAGTACGACCATCTTCTAATTGTTTACCGGCGAAAATAAGTCTTTGTTGATCAGGT 2712 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| || || | || ||||| || | || || ||| Sbjct 2713 GGGATACCTTCTTTGTCTTGAATCTTGGTCTTGACATTTTCAATGGTGTCAGAACCTTCA 2772 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||| | || || |||||||| || || || || | ||| || ||||| || Sbjct 2773 ACTTCCAAGGTGATTGTTTTACCGGTCAAGGTCTTTACAAAAATTTGCATGTT 2825 Score = 113 bits (124), Expect = 9e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | | ||| ||||| | || | || || ||| || || || Sbjct 2137 ATACCACCTCTTAATCTAAGTACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAGTCG 2196 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 ||||| || || |||| |||||||||||||| |||||||| | ||| ||||| || ||| Sbjct 2197 GATAAAGTACGACCATCTTCCAATTGTTTACCGGCAAAGATAAGTCTTTGTTGGTCGGGT 2256 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| || || | || || || || | || || ||| Sbjct 2257 GGGATACCTTCTTTGTCTTGGATCTTGGTCTTGACGTTTTCGATGGTGTCAGAACCTTCG 2316 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || || |||||||| || || || || | ||| || ||||| Sbjct 2317 ACTTCCAAGGTGATTGTTTTACCGGTCAAGGTCTTTACAAAGATTTGCAT 2366 Score = 113 bits (124), Expect = 9e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 |||||||| | || | | ||| ||||| | || | || ||| || || || || || Sbjct 2365 ATACCACCACGGAGTCTAAGTACCAAATGGAGGGTTGATTCCTTTTGA-ATGTTGTAGTC 2423 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 ||||| || || |||| ||||||||||||||||| || || | ||| |||||||| || Sbjct 2424 GGATAAAGTACGACCATCTTCCAATTGTTTACCAGCGAAAATAAGTCTTTGTTGATCGGG 2483 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 ||| || |||||||| ||||| || || | || ||||| || | || || ||| Sbjct 2484 TGGGATACCTTCTTTGTCTTGGATCTTGGTCTTGACATTTTCAATGGTGTCAGAACCTTC 2543 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || || |||||||| || || || || | ||| || ||||| Sbjct 2544 AACTTCCAAGGTGATAGTTTTACCGGTCAAGGTCTTGACAAAAATTTGCAT 2594 >seq222 Length=228455 Score = 129 bits (142), Expect = 1e-24 Identities = 198/278 (71%), Gaps = 11/278 (4%) Strand=Plus/Plus Query 49809 ttcgcatatattaaACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCA 49868 |||| || | |||||| ||||||| | ||||||||| || || | | |||| |||| Sbjct 135058 TTCGAGTAGAGTAAACAGGCAAAATTACAATGTAAACCTTCATCACGACTGATAAGTTCA 135117 Query 49869 TTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAA 49928 || |||||| ||||||||||| |||||||||||||| | ||| || || || |||| Sbjct 135118 TTGGAAAAAGTCAATCCTGGCATCAATCCTCTCTTTTTCAACCAGAAAATCGAACAAAAA 135177 Query 49929 CTACTAGAAAAGAATATACCCTCGACACACGCAAATGCTATTATTC-TTGCTCCAAACAT 49987 || | | |||||||||||| || || ||||| |||| | | || | ||| || Sbjct 135178 CTGCCACTAAAGAATATACCTTCTACGGCTGCAAAAGCTACCAAACGTTCAGCAAAAGAT 135237 Query 49988 T---AATTTATCATCTAATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGG 50044 | ||||| | ||| || | |||| |||||||| ||||| || || | | | || Sbjct 135238 TTTGAATTTGTAATC-CATCT-CAAT-----GCCCAATCAGCTTTCTTCTTTACACATGG 135290 Query 50045 TATATTTTCTATAGCTTTAAATAATTCAtttttttCAT 50082 || |||| ||||| ||||||| | | ||||||||| Sbjct 135291 AATTGTTTCAATAGCATTAAATAGTCTAGTTTTTTCAT 135328 Score = 98.7 bits (108), Expect = 2e-15 Identities = 171/244 (70%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 50209 CTAAATTCTCAGATACAATACCATCAGATGCTGCGAAGAATGCTAAAACGTATTTAATAA 50268 ||||||| ||| || ||||| ||| ||||| ||||| |||| ||| | |||| Sbjct 135545 CTAAATTTTCATTAACGATACCGTCACTGGCTGCAAAGAAAGCTAGAACATGAGAGATAA 135604 Query 50269 AATGTTTTTCATTATCTTTTAA---ATTTTCCCAAGATTCAAGATCGTTTGATAAATCTA 50325 ||||| |||||||||| ||||| ||| |||||| | | ||| |||| | ||| | Sbjct 135605 AATGTCTTTCATTATCGTTTAATTTATTCTCCCAATCATAGATATCATTTGCAAGATCGA 135664 Query 50326 CTTCTTCTATTGTCCAAAATGATGCTACGGATTTTTTATACATTTG-ATATATATCAAAA 50384 ||| ||| |||||||||||| ||| | | || || || || || | |||||| | Sbjct 135665 TTTCCTCTGCTGTCCAAAATGAAGCTTCAGCATTCTTGTA-ATATGCCCAAATATCACTA 135723 Query 50385 TGTTCAATGGGAAATAGTACATATCGTTTAGTAtttttttCTAATATCGGTTC-TCGTAT 50443 | || ||| || |||| |||| ||| | |||| | || ||| || ||||| || | | Sbjct 135724 TATTTAATTGGGAATAATACAAATCTATCTTTATTCTCTTTTAAAATTGGTTCTTCTTGT 135783 Query 50444 ATTT 50447 |||| Sbjct 135784 ATTT 135787 >seq391 Length=66319 Score = 107 bits (118), Expect = 4e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 192328 ACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCC 192387 |||||||| | || | || || ||| || ||||| ||| || || |||| || Sbjct 37228 ACTAAATGGAGGGTTGATTCCTTTTGGATGTTGTAATCTTGTAAAGTACGACCATCTTCT 37287 Query 192388 AATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGT 192447 |||||||||||||||||||| | ||| |||||||| || || || |||||||| ||||| Sbjct 37288 AATTGTTTACCAGCAAAGATAAGTCTTTGTTGATCGGGGGGGATACCTTCTTTGTCTTGG 37347 Query 192448 ATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 192507 |||||| || || || || | ||||| |||||||| |||||||| || ||| Sbjct 37348 ATTTTAGCCTTGACGTTTTCGATGGTGTCTGATCCCTCTACTTCGAGAGTAATCGTCTTA 37407 Query 192508 CC 192509 || Sbjct 37408 CC 37409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984381941484900