Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq332 199 1e-45 seq54 178 4e-39 seq1626 158 4e-33 seq1819 145 2e-29 seq3596 107 6e-18 seq222 102 2e-16 seq439 98.7 3e-15 seq329 95.1 4e-14 >seq332 Length=17232 Score = 199 bits (220), Expect = 1e-45 Identities = 402/596 (67%), Gaps = 3/596 (1%) Strand=Plus/Minus Query 155910 ACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC 155969 ||||| |||||||| | ||| |||| | ||||||||||| || | || Sbjct 4971 ACACGTTCCATAAAGAGATCGGAAACCCAGAGGGCATAGAAAAGATCACGAGCACGAATT 4912 Query 155970 TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGC 156029 || || | ||||||||||| | || || ||||| |||||| | ||| ||| Sbjct 4911 TCTTCCTTTCCGTGATTCTTTTTCAAATCCAAAAATTCAAAAATATCTGCATGCCATGGT 4852 Query 156030 TCCAGATACATAGCAAAACTACCATTCCTCTTGCC---ACCCTGATCTACATACCGAGCA 156086 |||| ||| | |||||| ||| || |||||||| ||| ||||||||||| ||||| Sbjct 4851 TCCAAATAAACGGCAAAAGCACCTTTTCTCTTGCCTCCACCTTGATCTACATAACGAGCG 4792 Query 156087 GTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGA 156146 || | ||| ||||||| ||||| |||| | ||||||||||| |||||||| || ||| Sbjct 4791 GTATCATTAAAGACACGAAGCATTGGAACCAATCCATTGGAAGTTCCATTGGTACCACGA 4732 Query 156147 ATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTA 156206 |||| || || | |||| || |||| | | ||||||||||| | | || Sbjct 4731 ATATAACTACGAGCAGCACGAATCTTGTGAACAGCAATACCAATACCACCAGCAGACTTT 4672 Query 156207 GAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATT 156266 |||||| || || |||| |||| | |||| || || ||| |||||| | |||| Sbjct 4671 GAAATTAAGGCAGTTTGTTTTAGGGTATCGTAAATTCCCTCGATACTATCATCCTTCATT 4612 Query 156267 GATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGT 156326 || | | || ||| | |||||| || || ||||| ||||| |||||||| Sbjct 4611 TGTACCAAGAAACAAGAAGACATTTGAGGATAAGGAGTACCAGCATTGAAAAGTGTAGGA 4552 Query 156327 GTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGA 156386 || |||||| |||| | || || | | ||| || || ||| || |||| | Sbjct 4551 GTAGCATGAGTAAACAATTTCAATGATAATTTATCATAGGTAAGGATAACATTATCAATA 4492 Query 156387 TTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATC 156446 | || ||||||| | ||| || | |||| ||||||| |||||||| |||||||| Sbjct 4491 TCCTCACCATGAATACCCAAAGAAACACGCATCAACATATGTTGAGGACGTTCTACAATG 4432 Query 156447 ACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATC 156502 | |||| |||| | || || | ||||| ||||||||| || || |||| Sbjct 4431 ATACCATTAATTTTGTGTAGATAACTTCTTTCCAAAGTTTTAAAACCAAAGAAATC 4376 >seq54 Length=99412 Score = 178 bits (196), Expect = 4e-39 Identities = 503/766 (66%), Gaps = 9/766 (1%) Strand=Plus/Minus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACA--ATCTC 155644 ||||||| ||||| || || |||||| ||| | | || | ||||| || | || || Sbjct 90371 CAATAGAGGCCAGGTTGCACACCGCAACCTCATCGG-GT-GATGTATACTCGATGATTTC 90314 Query 155645 ACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACA 155704 | || ||||| ||| || || |||||||| ||||| || ||||| || || Sbjct 90313 AGTACATAGGTTGCTTGACTTAATAGTTCCTAAATTTTTCTGATTCGATTTTCTATTGGC 90254 Query 155705 AGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAG 155764 | ||||| || | || || || | || || || ||||| || || || || | Sbjct 90253 ACTGTCCTTATACAACATATAAGGCATGCCCGTTTCGATCTGGGCCTCTAGGATGGCAAA 90194 Query 155765 CCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTG-CCTTCCGACTCATATTTCATAT 155823 ||| || || | || ||||| | || | | || ||||| ||||| || ||| Sbjct 90193 CCACAGTTCTTGTGCTTTAATG-GATTTTCGGGCCTTTCCTTCTCGTTCATACTTTGTAT 90135 Query 155824 ACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAA 155883 | | | | | | || || ||||| || |||||| || | || |||||||| Sbjct 90134 ATAAGGCTTCAAAGGCTTCTCCATAACAGTCTGCCAGTCCCGGTGCTTCATTGGGGCAAA 90075 Query 155884 ACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAG 155943 | |||||||| || ||| |||||| | ||| || | ||| ||| | | Sbjct 90074 AGAGCGACCATTCTTCATTGTTCTCTACACGTTGCATGAAAAGGTCAGAAATCCAGAGGG 90015 Query 155944 CATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGA 156003 ||||||| ||||| | ||| |||| || | ||||||||| || ||||| ||||| | Sbjct 90014 CATAGAACAGGTCGCGTGCACGCAACTCTTCTTTGCCGTGATTTTTTCGTAGGTCTAAAA 89955 Query 156004 ATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTGC 156063 | || |||||||| || || |||| ||| || |||||||| || || || | | Sbjct 89954 ACTCAAAAATATCAGCGTGCCAAGGTTCCAAATAAATGGCAAAACTTCCTTTTCTTCTTC 89895 Query 156064 CACCC---TGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATAC 156120 | ||| || ||||| || ||||| ||| ||| ||| | |||||| || | ||| | Sbjct 89894 CTCCCCCTTGGTCTACGTAGCGAGCGGTCATATCAAAGTTGCGTAGCATGGGTACAATGC 89835 Query 156121 CATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATAT 156180 |||||||| ||||||||||| ||| | || || | || || | || ||||||| Sbjct 89834 CATTGGAAACCCCATTGGTTCCTTTAATGTAAGAGCCTGTTGCACGGATATCATGAATAC 89775 Query 156181 GTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAA 156240 || ||| | ||||||| | ||| ||||||| ||| || | |||| ||||| | | Sbjct 89774 TTAATCCCACGCCACCTGCCGATTGTGAAATTTTAGCACACTGTTTTAAAGTATCATAGA 89715 Query 156241 TACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTG 156300 | || ||||| ||| || | ||| | || || | || || || || ||| | Sbjct 89714 TGCCATCAATGCTATCTTCCTTCATGGTGAGCAGGAAACAGGAGGATAGCTGTGGTTTAG 89655 Query 156301 GTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTT 156346 | ||||| || || || || ||||| || ||||| |||| |||| Sbjct 89654 GCGTTCCTGCATTAAAAAGGGTAGGGGTAGCATGTGTAAACCACTT 89609 Score = 147 bits (162), Expect = 6e-30 Identities = 306/445 (69%), Gaps = 28/445 (6%) Strand=Plus/Plus Query 133202 GATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTT 133261 |||||| ||| ||||| ||| | || || || ||||| || ||||| ||||||||| Sbjct 88169 GATGAACGACACTTTATCTCTCACGTATTGGCTTTCTTTGCAGCTAGTGACGGTATTGTT 88228 Query 133262 CTTGAAAATTTAG--GAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCCCGTGCCT 133319 ||||||||||| ||| || ||| | | ||||| || | || ||| || Sbjct 88229 AATGAAAATTTAGCAGAAAAC--TTTGTAGCTGAAGTACAGTATACAGAGGCCAAATTCT 88286 Query 133320 TTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTC-TAATT 133378 ||||||| | |||||||| | || ||||||||||| || ||||| |||| | ||| Sbjct 88287 TTTATGGCTTCCAGATTGCTGTAGAGAATATCCATTCAGAAACCTATTC-ACTCCTCATT 88345 Query 133379 GATACTTACATCAAAGATACCGTCCAGAAGCACAAA----CTATTCAACGCCATTAGCGA 133434 ||||| ||||| || ||| | || |||| | ||| || ||||| ||||| ||| Sbjct 88346 GATACCTACATTAAGGATCC--TCAAGAA--AGAAATCGCCTTTTCAATGCCAT---CGA 88398 Query 133435 ATTTCCT----TGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGC 133490 ||| ||| |||| || ||| | || |||||| | ||||| || ||||| Sbjct 88399 CAC-CCTCGACTGTGTTAAGAAAAAAGCAGAATGGGCTTTACGTTGGAT--AGACCAAGC 88455 Query 133491 GTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTG 133550 | ||||||||| | ||| |||| ||||| | ||||| |||||||| ||| || Sbjct 88456 G----AGTTTTGCTGAAAGACTCATTGCCTTTGCAGCTGTAGAAGGCATTTTCTTCTCTG 88511 Query 133551 GTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTT 133610 || || ||||| || || ||||| ||||| | || | | || || || | || | Sbjct 88512 GTAGCTTTTGCTCGATCTTCTGGCTCAAAAAAAGGGGATTAATGCCCGGTCTTAGCTTCT 88571 Query 133611 CTAACGAACTTATTTCAAGGGACGA 133635 | |||||||| ||||| |||||||| Sbjct 88572 CCAACGAACTCATTTCTAGGGACGA 88596 >seq1626 Length=5776 Score = 158 bits (174), Expect = 4e-33 Identities = 243/342 (71%), Gaps = 6/342 (2%) Strand=Plus/Plus Query 302538 ATTTCTTACGGTCATATCATAACCAA-TCATAATGTCTTCCATACTCTTGATTAAACGAC 302596 |||||| ||||| |||||| || | ||| || |||||| || | | ||||| Sbjct 2095 ATTTCTAACGGTAGCATCATATTTAACTGATACA-TCCTCCATAGCTTTTACGAGACGAC 2153 Query 302597 GCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCAC 302656 | ||||||||||||||| ||||||||||||||| |||||||| ||||| | | ||||| Sbjct 2154 GTTGAATATAACCAGTTTCAGATGTTTTTACAGCAGTATCAATGAGACCTTCTCTACCAC 2213 Query 302657 CCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGA 302716 ||||||| |||||||| |||| ||| | || | | | |||| |||| |||| Sbjct 2214 CCATAGCGTGGAAGAAATATTCTTGGGGTGTCAAACCTCTGAGATAGGAATTCTCGACGA 2273 Query 302717 AACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCAT 302776 ||||||| || || || || ||||||||| ||||| || || | || | Sbjct 2274 AACCACGACTTTCAGGACCATAATCATCCTTGGTAAAATGTGGAAGTGTACGATTTTGGA 2333 Query 302777 AGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCG 302836 | || |||| ||||| || || || ||||| || || || | || | |||||||| | Sbjct 2334 AACCAAATGGAATACGTTTACCTTCGACGTTTTGTTGACCGACACAAGCCATCATCTGTG 2393 Query 302837 AAATATT--TAAATCACTGCCCTTGGAGCCAGCATTTACCAT 302876 ||||||| ||||| | || ||||| || ||||||||||| Sbjct 2394 AAATATTAATAAATGA--ACCTTTGGAACCTGCATTTACCAT 2433 Score = 98.7 bits (108), Expect = 3e-15 Identities = 105/138 (76%), Gaps = 3/138 (2%) Strand=Plus/Plus Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874 |||||||| | ||| || |||||| | |||||||| ||| || | ||||||||||| Sbjct 1327 AATTTCTTTGAGACGAGGTACACCAAGTGTTACGTT---CTTTGAAGATACACCAGCAAA 1383 Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934 || |||||||| ||||| | ||||| | || |||||||| |||||| ||||| Sbjct 1384 ATGAAAAGTATTAAGAGTCATCTGAGTGGCAGGTTCACCAATGGATTGTGCTGCAATAGC 1443 Query 301935 ACCAACCATTTCTCCTGG 301952 ||| |||||||| ||||| Sbjct 1444 ACCGACCATTTCACCTGG 1461 >seq1819 Length=3716 Score = 145 bits (160), Expect = 2e-29 Identities = 664/1036 (64%), Gaps = 28/1036 (3%) Strand=Plus/Plus Query 155319 GCCGCAAAATAAATTGTCTCAAAGATATATTTATTGACTGTTTTAGCCTCCTCAGATGTA 155378 || || |||||||| || ||||| || | |||||| | |||| ||| | ||| | | Sbjct 1660 GCAGCGAAATAAATCGTTTCAAAAATTTCTTTATTTAAAATTTTTGCCCCTTCACTTTCA 1719 Query 155379 AATGCGATATCCATCTTGAAAAATGTGTCGGCTAAACCCTGAACTCCAATACCGACTGGG 155438 |||| | | |||| || ||| | || || || ||||| || || | ||| ||||| Sbjct 1720 AATGGTAAACGCATCAGGATAAAAGCATCTGCCAATCCCTGTACACCTAAACCAACTGGT 1779 Query 155439 CGATGCCTGTAATTGCTCCTGCTTGTCTTCTTGTTTGGG-TAAAAATTCACATCAATAAT 155497 | || | ||| | | | |||| | | || ||| |||| ||||||||| Sbjct 1780 CTGTGGCGCATGTTGGAATTTTTAG-CTTCCTCTACCGGATAATAATTATGATCAATAAT 1838 Query 155498 GTTATTTAAATTT---GTAACCA-ATACCTTGGTTACGTCTGCTAATTTCACATAGTCAA 155553 ||||| | || ||| || ||| |||||| || ||||||| || |||| Sbjct 1839 TTTATTCAGGTTCAGGGTAGCCTGATA----GGTTACATCATATAATTTCTGATGATCAA 1894 Query 155554 ATGTTTTATCC-TCATTTACAAA-CATACCAAGACCAATAGACGCCAGATTACATACCGC 155611 | | ||| | | ||||| | | ||| |||| || ||||| |||||||| || Sbjct 1895 AC----TCTCCGTTGATGACAAATCTTGGCAAAGCCAAC-GAGGCCAGGTTACATACAGC 1949 Query 155612 AGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGT 155671 | ||| | | | | || |||| ||| || || ||||| ||||| |||||||| Sbjct 1950 AACCTCGTCTTTGGAAGTATACTCTATAATTTCTGTACAAAGGTTGGAACTTTTGATGGT 2009 Query 155672 GCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGT 155731 |||||||| | |||||| ||||| ||||| ||||| || || | | || ||||| Sbjct 2010 TCCTAAATTTTGCTGGTTGGATTTGCTGTTTGCTGCATCTTTATACAACAGATAAGGGGT 2069 Query 155732 TCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTT 155791 ||| || || ||||||| |||||||| | ||| || || | || ||||| || Sbjct 2070 TCCGGTTTCAATCTGTGAATCCAGAATGGCAAACCAAAGCTCTTGTGCTTTAATGGTTTT 2129 Query 155792 GTTGTATCTGCCTTCCGACTCATATT--TCATATACAGCGTTCGGTAATCCT-CACCGTA 155848 | | ||||| || || ||||||| ||| | || ||| || |||| | Sbjct 2130 ACGGGCACGTCCTTCTTTTTCGTAACGCTCATATAAAGCAT-CG--AATTCTGCACCAAA 2186 Query 155849 ACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGAT 155908 ||||| |||||| ||| | || || || || | ||| | || | Sbjct 2187 GCAATCTGCCAGTCCCGGGGCTTCATGAGGACAGAATAAACTCCAGTCTCCGTTTTCTTC 2246 Query 155909 TACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGA 155968 ||| | ||| || | |||| |||||| |||||||| | || || || Sbjct 2247 TACCCTTCTCATGAACAGGTCACATACCCAAAGGGCATAGAATAAATCTCTGGCACGAAG 2306 Query 155969 CTCCTCATCGCCGTGATTCTTCCGTAGCTCTA-AGAATTCCTCAATATCAGGATGGTGTG 156027 || || | || || || || || || || | | || || || ||| | ||| || Sbjct 2307 TTCTTCTTTACCATGGTTTTTACGCAGGTCCAGAAAACTCAGCAC-ATCTGCATGCCATG 2365 Query 156028 GCTCCAGATACATAGCAAAACTACCATTCCTCTTGCC---ACCCTGATCTACATACCGAG 156084 ||||||| || || |||||| ||| || | || || |||||| || ||||| || | Sbjct 2366 GCTCCAGGTAAATGGCAAAAGCACCTTTACGTTTACCTCCACCCTGGTCCACATAACGGG 2425 Query 156085 CAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGC 156144 | || | || || || | |||||| | ||| |||||| || || || ||||| | Sbjct 2426 CGGTATCGTTAAATACTTTCAACATAGGTACAATCCCATTGCTGGTCCCGTTTGTTCCAC 2485 Query 156145 GAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATT 156204 ||||| || || | | || | ||||| || || ||||||||||||| | || Sbjct 2486 CAATATAAGATCCCGTGGCACGGATGTTATGGATGCTTAAACCAATACCACCTGCGCTTT 2545 Query 156205 TAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCA 156264 ||||||| |||| || |||| ||||| | |||| ||||||||| || || | || Sbjct 2546 GTGAAATTTTAGCGGTTTGTTTTAAAGTATCGTAAATTCCTTCAATACTGTCGTCCTGCA 2605 Query 156265 TTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAG 156324 | | |||| | |||| ||| | ||||||| || || | || || |||| || | Sbjct 2606 TGGTCAGTAAAAAGCAGGAAGACATTTGAGGTTTAGGGGTAGCTGCATTAAATAAAGTTG 2665 Query 156325 GTGTTGCATGAATAAA 156340 | |||||||| |||| Sbjct 2666 GGGTTGCATGCGTAAA 2681 >seq3596 Length=2072 Score = 107 bits (118), Expect = 6e-18 Identities = 251/376 (67%), Gaps = 16/376 (4%) Strand=Plus/Minus Query 133211 CATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAAT 133270 ||||| |||||| || | || ||||||||||| ||||| || ||||| |||||| Sbjct 479 CATTTCATTTCTCATATACTTGCTTTTTTTGCTGCAAGTGACGGCATTGTAAATGAAAAC 420 Query 133271 TTAG----GAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGG 133326 | | |||| || ||| | ||||| || || ||||||||||| |||||||| Sbjct 419 CTTGCAGTGAAC----TTCATGAGCGAAGTACAGCTTCCCGAAGCCCGTTGTTTTTATGG 364 Query 133327 GCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCTAATTGATACTTA 133386 | ||||| ||||||||| ||||| ||| || ||| | || || ||||| || Sbjct 363 CTTCCAGATCATGATGGAAAACATCCACTCTGAAACCTATGCGCTGCTGATCGATACCTA 304 Query 133387 CATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGCCATTAGCGA-ATTTCCTTGTA 133445 || |||||| | | | || ||| || ||| | ||| ||| || |||||||| Sbjct 303 TATTAAAGATCCTGAAGAAAAAGACAGGCTGTTCCATGCC-GTAGAGACGGTTCCTTGTG 245 Query 133446 TTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTA 133505 | || || ||| | || ||||| | ||||| ||| | | | |||||| Sbjct 244 TAAAGAAAAAAGCAGAATGGGCATTGCGCTGGATTGAGG------GCGGAAATTTTGCCG 191 Query 133506 CTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTA 133565 ||| | || ||||| || | ||| || |||||||| ||||| || ||||| || | Sbjct 190 AACGTTTGGTGGCTTTCGCCGCAGTGGAAGGCATTTTCTTCAGCGGGAGCTTCTGTTCGA 131 Query 133566 TTTTTTGGCTTAAAAA 133581 | || ||| | ||||| Sbjct 130 TCTTCTGGTTGAAAAA 115 >seq222 Length=228455 Score = 102 bits (112), Expect = 2e-16 Identities = 117/155 (75%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 133203 ATGAAAAACATTTTATTTCT-ATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTT 133261 |||||| ||||||||| ||| ||| || |||| || ||||| || ||||| ||||| ||| Sbjct 135616 ATGAAAGACATTTTATCTCTCATG-TTCTAGCTTTCTTTGCAGCCAGTGACGGTATCGTT 135558 Query 133262 CTTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTT 133321 ||||||||||| || || ||| | ||||||||| | | ||||| ||| || Sbjct 135557 AATGAAAATTTAGCCACCAAATTCATGAGTGAAGTTCAAATTCCAGAAGCTCGTTGTTTC 135498 Query 133322 TATGGGCTACAGATTGCGATGGAAAATATCCATTC 133356 ||||| | || ||||| || |||||||| ||||| Sbjct 135497 TATGGTTTTCAAATTGCAATTGAAAATATTCATTC 135463 >seq439 Length=55205 Score = 98.7 bits (108), Expect = 3e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 60217 TAGATTAATGTTGTTAGAGCCTACGAAATTTTGAGCGAGACCAACAATAGCACCATTTAA 60276 || |||||| || || || || || ||||||||||| | |||||||||||| ||| Sbjct 33313 TAAATTAATATTATTGGAACCAACAAAATTTTGAGCCATACCAACAATAGCTTGTGATAA 33254 Query 60277 ACTGGCTTCACCGTGATGATATCCAGAATGTTCTGAAACATATCCACTGAATTGTGCGAC 60336 ||| |||||| ||||| ||| | | |||||||||| ||||||| | ||||| || || Sbjct 33253 ACTTTGTTCACCATGATGGTATGCTGTGTGTTCTGAAATATATCCAATTAATTGAGCAAC 33194 Query 60337 TTTAATTTC 60345 ||||| ||| Sbjct 33193 TTTAACTTC 33185 >seq329 Length=40361 Score = 95.1 bits (104), Expect = 4e-14 Identities = 223/332 (67%), Gaps = 6/332 (2%) Strand=Plus/Plus Query 289028 TACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTG 289087 ||||||| ||||||||||| |||||||| | | ||| |||| | ||| | || || Sbjct 25827 TACCAACGGCATCAATTTCATCAATGAATACAATACATGGAG--TGTTGGCACGGGCTTC 25884 Query 289088 CA--AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGA 289145 || |||||||| ||||| |||| || | ||| ||| |||| |||| || ||||| Sbjct 25885 TTTGAACAATTCTCTAACACGTGATGGACCGACACCGACAAACATCTCTATGAAATCAGA 25944 Query 289146 AGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGT 289205 |||| | || ||| | ||| | ||| || ||| || | |||| | ||| Sbjct 25945 TCCGGAAATGGTAAAGAAAGCAACACCAGATTCACCGGCTGTGGCTTTAGCCAACAATGT 26004 Query 289206 CTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGA 289265 ||| || ||||||||||| || | |||| | | |||||||| | || || Sbjct 26005 CTTTCCAGTTCCAGGTGGACCGACCAATATAGCACCCTTTGGAATACGAGCACCCAATTT 26064 Query 289266 CTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTC 289325 ||| || || || || |||||| |||| |||| ||| || || | || || || Sbjct 26065 CTTGTACTTTTCCGGATTCTTTAGGAATTGAACAAACTCCATAATCTCCTCCTTGGCTTC 26124 Query 289326 ATCACAT-CCTGCTACATCAGCAAAAGTAATA 289356 ||| ||| || |||||||| ||||||| || Sbjct 26125 ATC-CATACCAGCTACATCCTTAAAAGTAGTA 26155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471671000527838