Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_021331.1 Length=51821 Score E Sequences producing significant alignments: (Bits) Value seq1340 86.0 2e-12 >seq1340 Length=18762 Score = 86.0 bits (94), Expect = 2e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 38170 TTTGCAACTGGTGGATACACTGGCGACGGCGGGAAGTATGAGCCAGCAGGTGTTGTTCAT 38229 |||||||| || |||| || || |||||| || ||||||||||| || ||||||| Sbjct 6888 TTTGCAACCGGAGGATTTACGGGAACCGGCGGCAAATATGAGCCAGCGGGGATTGTTCAC 6829 Query 38230 AAAGGCGAGTTTGTCATGACGAAGGAGGCCACGAAGCGGATCGGAGTTGGAAACCTTTAC 38289 || || |||||| | || |||||||| || | ||||| || || || || || ||| Sbjct 6828 CGTGGTGAATTTGTCTTCACAAAGGAGGCAACCAGCCGGATTGGCGTGGGGAATCTCTAC 6769 Query 38290 AAAATGATGCGCGGTTATGC 38309 |||||||||| ||||| Sbjct 6768 CGGCTGATGCGCGGCTATGC 6749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 165690302680404