Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_021774.1 Length=29742 Score E Sequences producing significant alignments: (Bits) Value seq1445 143 5e-30 >seq1445 Length=14432 Score = 143 bits (158), Expect = 5e-30 Identities = 241/344 (70%), Gaps = 6/344 (2%) Strand=Plus/Plus Query 369 AAGTCATCCTTTGTGGCGACCTCGCTCAATGGCACGATTTTTATGCCGTCCGGTTTCCCG 428 || || ||||| | || |||||||||| || | || | |||||||| || || Sbjct 11998 AATTCGTCCTTGGCCGCAACCTCGCTCACCGGGATGAGCTGAATGCCGTCTTTCTTGCCT 12057 Query 429 TTCGGTGAGTAGAAAAACAGGTTTTTAAAGTTGCCGAGCCCTTTAGAGTTACGCATTGCA 488 ||| | ||| | ||||||||| ||||||||| ||||||| ||||| || ||| Sbjct 12058 GCCGGCGCGTACACAAACAGGTTGCGAAAGTTGCCTGGCCCTTTCGAGTTCTTCAGTGCG 12117 Query 489 TCGCGCAGCGATTCGACGTCAGTCGCGCTT-TGCGCCGGGTCAGTCACATACATGATGTA 547 |||||| || |||| ||| || ||| ||||||| ||| |||| |||| ||| | Sbjct 12118 GTGCGCAGTGAGTCGATGTCC-TCTTCCTTCTGCGCCGCGTCGGTCATGTACAGAATGAA 12176 Query 548 ACCTGCGTGCGCGCCGTTCTGGTAATACTTGCGGCGGAACAGCGTCGCGGATTCATTCAG 607 ||| || || |||||| | ||| |||||||| ||||||||||| ||| || || || Sbjct 12177 ACCGGCATGGCTGCCGTTGTTGTAGTACTTGCGCCGGAACAGCGTGGCGCTCTCGTTGAG 12236 Query 608 CCAGGCGGAATTAAGTGCGCTG--AGATATTCAGGCAGGCCGTAAATCTCCTGATTAATA 665 | ||| || |||||| || | || ||||||||||| || ||||| || ||| Sbjct 12237 CAGTGCG--CTTTGCAGCGCTGCCAGCCACTCCGGCAGGCCGTAGATTTCCTGGTTGATA 12294 Query 666 TCAGGCTCCAGCAGGTGGAACACGGTATCGGGTGCGAATTCATG 709 || | ||| ||| |||| | | | | |||| || |||||||| Sbjct 12295 TCGGCCTCGCGCAAGTGGCAGATCGAACCGGGGGCAAATTCATG 12338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 95044025081952