Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_021856.1 Length=155631 Score E Sequences producing significant alignments: (Bits) Value seq6136 91.5 1e-13 >seq6136 Length=575 Score = 91.5 bits (100), Expect = 1e-13 Identities = 185/272 (68%), Gaps = 11/272 (4%) Strand=Plus/Minus Query 91327 CTTAACAACGAGATCATGATTCAGAAGGACGGCAAGTTCCAGTTTGAAAAGGACAAAGAA 91386 || || || ||||||||||| | ||||||| | |||| | ||||||| ||||| || Sbjct 465 CTCAATAATGAGATCATGATCAAAAAGGACGACGAGTTTAACCTTGAAAAAGACAAGGAG 406 Query 91387 GCCGT----TCATAGCTATTTTGTGGACTATGTGAATCAGAACACTGTGTTCTTCCACAA 91442 ||||| ||| || ||| |||| ||||| ||| | || || || ||||| ||| Sbjct 405 GCCGTAAGGTCA----TACTTTCTGGATTATGTCAATAAAAATACCGTTTTCTTTTACAC 350 Query 91443 CCTTAAAGAGAAGCTTGACTACTTGATCGAAAACGAGTATTACGAAGAGGAGTTTTTATC 91502 ||| ||||| || | |||||| |||| |||||| | || ||| | | | |||| | Sbjct 349 CCTGAAAGAAAAAATAGACTACCTGATTGAAAACAATTACTAC-ATCA--ATTTTTAAGA 293 Query 91503 TAAATACTCTTTCGAGGATATCAAAGAGGTTTTCAAGCTGGCTTACAGTAAGAAGTTCCG 91562 | || || || || || || || ||| | | | | || || || ||||| Sbjct 292 GCAGTATTCCTTTGAAGAGCTCCAAAGGGTATATGATTTTGTGTATTCCAAAAAATTCCG 233 Query 91563 TTTCCCTTCATTCATGAGTGCATTTAAGTTTT 91594 || | || ||||||||||| |||||||||| Sbjct 232 CTTTCAGTCTTTCATGAGTGCCTTTAAGTTTT 201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 497842817422640