Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq5201 107 2e-17 >seq5201 Length=2668 Score = 107 bits (118), Expect = 2e-17 Identities = 221/329 (67%), Gaps = 0/329 (0%) Strand=Plus/Minus Query 92601 TCGGCGATCTGGCGCGTGAGGGCCTCCTGCACCTGGAAGCGGTCGGAAAACATGTCGACG 92660 |||||||||||||| ||||| ||||| | ||| | |||| || | |||| |||||| Sbjct 2596 TCGGCGATCTGGCGGCTGAGGTTTTCCTGGATCTGCAGGCGGCGGGCATACATATCGACG 2537 Query 92661 ATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGTGGGCAGGTAGCCCACGTGGGCC 92720 || |||| || ||| |||||| | | |||| | || | || | ||||| ||| Sbjct 2536 ATACGCGCGACCTTCGACAGGCCCAGCACTTTGCCGCTCGGGATATACGCGACGTGAGCC 2477 Query 92721 TTGCCCATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCGACGTCGCGCACG 92780 ||||| || || |||||||| ||||| ||||||| ||| | || |||| ||| || Sbjct 2476 TTGCCGATGAACGGCAGCAGGTGGTGTTCGCACAGCGAGTACAACTCGATGTCCTTGACC 2417 Query 92781 ATCACCATCTCGCCCGAGGCCTCGGCAAAGAGCGCGTCGCCGATGGCCTCGGCCAGCGTC 92840 | |||||| |||| | | | || | || || | || | || | || ||| Sbjct 2416 AGCACCATTTCGCTGTTGTCAGAGCTGAACAAGGCACCGTTGGTGACTTCTTCGAGGGTC 2357 Query 92841 ATGCGGTGGCCGCGCGTGCGCTCCACCATGGCCTTGGCCACGCGCATCGGCGTGTCCAGG 92900 | ||||| | | | | |||||||||||| | || | |||||||| || Sbjct 2356 TGTTCATAACCGCGGCAGAGATACTGCATGGCCTTGGCGGCACGTTTTGGCGTGTCGAGC 2297 Query 92901 AGGCCCTCGCGCCGCACGTCCTCGCCCAG 92929 ||||||||||| ||||||||||| || Sbjct 2296 AGGCCCTCGCGGGAAACGTCCTCGCCGAG 2268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106501229154358