Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq439 129 7e-25 >seq439 Length=55205 Score = 129 bits (142), Expect = 7e-25 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 165951 TTAAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAAC 166010 |||| ||||||||||||| ||| ||| || ||||||| |||| || | |||||||||| Sbjct 33189 TTAAAGTTGCTCAATTAATTGGATATATTTCAGAACACACAGCATACCATCATGGTGAAC 33248 Query 166011 AAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAG 166070 ||| ||||| || |||| || | || ||| ||||||||||| | |||||||| Sbjct 33249 AAAGTTTATCACAAGCTATTGTTGGTATGGCTCAAAATTTTGTTGGTTCCAATAATATTA 33308 Query 166071 CATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCTG 166130 |||||| |||| |||| | || |||| |||| | || ||||||||| ||||| Sbjct 33309 ATTTACTTTTCCCTGCTGGTAATTTCGGTAGTAGATATAATGGTGGTAAAGATGCTGCTA 33368 Query 166131 CATCAAGATATATTTATAC 166149 ||||||||||| |||| Sbjct 33369 GTGCAAGATATATTCATAC 33387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632428137823120