Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_023561.1 Length=173276 Score E Sequences producing significant alignments: (Bits) Value seq7039 89.7 6e-13 seq520 84.2 2e-11 >seq7039 Length=691 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 74609 TGGTGACCCCAGCAGGACTCGAACCTGCAACCTAGCGATTATGAGTCGCGTGCTCTAACC 74668 ||||| ||||| ||||||||||||| | ||| || ||||||||||| | |||||||||| Sbjct 428 TGGTGGGCCCAGTAGGACTCGAACCTACGACCAAGGGATTATGAGTCCCCTGCTCTAACC 369 Query 74669 AATTGAGCTATAGGGCC 74685 || ||||||||||| || Sbjct 368 AACTGAGCTATAGGCCC 352 >seq520 Length=453493 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 72104 TGGTGCCGGTTAACGGATTCGAACCGCTGACCCTCTCATTACAAATGAGCTGCTCTACCA 72163 |||||||| || |||| |||||||| ||||| ||||||| ||||| |||||||||| Sbjct 187487 TGGTGCCGCTTCCCGGAATCGAACCGAGGACCCCATCATTACGAATGATGTGCTCTACCA 187428 Query 72164 ACTGAGCTAAACCGGC 72179 ||||||||||| |||| Sbjct 187427 ACTGAGCTAAAGCGGC 187412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554301330533440