Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq439 116 5e-21 >seq439 Length=55205 Score = 116 bits (128), Expect = 5e-21 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 162999 TTAAGGTTGCTCAATTAAGTGGGTATGTTGCGGAACAAACAGACTATAAACACGGTGAAC 163058 |||| ||||||||||||| ||| ||| || | ||||| |||| || | || ||||||| Sbjct 33189 TTAAAGTTGCTCAATTAATTGGATATATTTCAGAACACACAGCATACCATCATGGTGAAC 33248 Query 163059 AAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAG 163118 ||| ||||| || |||| || | || ||| ||||||||||| | |||||||| Sbjct 33249 AAAGTTTATCACAAGCTATTGTTGGTATGGCTCAAAATTTTGTTGGTTCCAATAATATTA 33308 Query 163119 CATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCGG 163178 |||||| |||| |||| | || |||| |||| | || ||||||||| |||| Sbjct 33309 ATTTACTTTTCCCTGCTGGTAATTTCGGTAGTAGATATAATGGTGGTAAAGATGCTGCTA 33368 Query 163179 CATCAAGATATATTTATAC 163197 ||||||||||| |||| Sbjct 33369 GTGCAAGATATATTCATAC 33387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635115876616720