Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq321 91.5 2e-13 >seq321 Length=79416 Score = 91.5 bits (100), Expect = 2e-13 Identities = 174/252 (69%), Gaps = 6/252 (2%) Strand=Plus/Plus Query 93216 AATTATTTCATTCGGTGGAGCAAGTAACCCAGATATTTCATCTAAATTTTCAAT--TGAT 93273 |||| |||| || ||||| || || || || ||||| | |||| |||| |||| Sbjct 23097 AATTGTTTCTTTTGGTGGTGCTTCCAATCCTGAAATTTCCAATGAATT--CAATGTTGAT 23154 Query 93274 GAATTGGTTCAAACTTACTTTGATGTAATAGAATTATATAATCCATCTGGATTAGATTTT 93333 ||||||| | |||||| | ||||| |||||||||| ||| ||| || ||||| Sbjct 23155 AAATTGGTCGATACTTACAACCAAGTAATCACATTATATAATGCATATGGTTTGGATTTC 23214 Query 93334 GATTTAGAAAATGGTTTGTATGACGCAGAAAAAATAAGTTCAGCTGTTGGCATTGTCAAA 93393 ||||| ||||||||||| ||||| || || ||||| ||| | || || | | Sbjct 23215 GATTTGGAAAATGGTTTATATGATGCTGATAAAATTGTAGAAGCCTTAACCAAGGTAAGA 23274 Query 93394 TCTAAATACC-CTAATTGTAATATTTCTCTGACACTACCAACAATGCCAACTGGTTTAAC 93452 | | ||| ||| | ||| | | |||| ||||||||||| ||||||||||||| Sbjct 23275 GCCATTAACCTCTATATTCAAT-TCAGTTTGACTTTACCAACAATGACAACTGGTTTAAC 23333 Query 93453 GGCTGTTGGATT 93464 | | |||||| Sbjct 23334 TGATACTGGATT 23345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655216323166000