Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_023717.1 Length=151924 Score E Sequences producing significant alignments: (Bits) Value seq1822 84.2 2e-11 seq54 82.4 7e-11 >seq1822 Length=14309 Score = 84.2 bits (92), Expect = 2e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 148141 TAGCTCAGTTGGTAGAGCAACTGATTTGTAATCAGAAGGTCGCGGGTTCGAACCCTGCAT 148200 |||||||||||||||||||||||| |||||||||| ||||| ||||||||| |||| Sbjct 373 TAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCCCGGGTTCGACTCCTGGTG 432 Query 148201 CCAGCACCA 148209 || |||||| Sbjct 433 CCGGCACCA 441 >seq54 Length=99412 Score = 82.4 bits (90), Expect = 7e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 148140 TTAGCTCAGTTGGTAGAGCAACTGATTTGTAATCAGAAGGTCGCGGGTTCGAACCCTGCA 148199 ||||||||| ||||||||||||||| |||||||||| ||||||| ||||||| ||| ||| Sbjct 46778 TTAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCGCTGGTTCGATCCCGGCA 46837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 485981570151360