Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_023743.1 Length=47180 Score E Sequences producing significant alignments: (Bits) Value seq1340 86.0 2e-12 >seq1340 Length=18762 Score = 86.0 bits (94), Expect = 2e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 28223 ACCGCCGTTTGCGTATCCGCGCATCAACTTGTACAGGTTGTCTACGCCAATCCTTGAAGT 28282 ||| ||| | || || |||||||||| | ||| || || | |||||||||| || Sbjct 6739 ACCACCGGTGGCATAGCCGCGCATCAGCCGGTAGAGATTCCCCACGCCAATCCGGCTGGT 6798 Query 28283 TGCCTCCTTCGTAAACACGAATTCACCACGATGCACCGTACCAGCTGGTTCATACTTACC 28342 ||||||||| || || || ||||||||||| || || | || ||||| ||||| || || Sbjct 6799 TGCCTCCTTTGTGAAGACAAATTCACCACGGTGAACAATCCCCGCTGGCTCATATTTGCC 6858 Query 28343 TCCGTTACCAGTGTAGCCACCAGATGCAAA 28372 ||| | || || | || || | |||||| Sbjct 6859 GCCGGTTCCCGTAAATCCTCCGGTTGCAAA 6888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150840473687496