Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_025428.1 Length=59601 Score E Sequences producing significant alignments: (Bits) Value seq82 109 2e-19 >seq82 Length=463168 Score = 109 bits (120), Expect = 2e-19 Identities = 145/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 10747 GAACTGCGCCAGTTCATCGAGCGCGTCGAGCGCCTGGAGGTCGAGAAGA--AGGACATCG 10804 ||| |||| ||||||||||||||| |||||||||| |||| || |||| | | | || Sbjct 392917 GAATTGCGGCAGTTCATCGAGCGCATCGAGCGCCTTGAGGAAGAAAAGACCACG-CTTCA 392975 Query 10805 CGGACCAGGTGAAGGAGGTCCTGGCCGAGGCCAAGGCGCGGGGCTACGACACCAAGGTCA 10864 |||| | | ||||| || |||| || ||||||| || ||||||||||||||| ||| Sbjct 392976 -GGACGACATCAAGGAAGTGATGGCGGAAGCCAAGGGCCGCGGCTACGACACCAAGATCA 393034 Query 10865 TGCGCAAGATCATCGCAGAGCGCAAG-CGCAGCCGCGACGACATCAACGAGGAGGAAGCC 10923 | |||| |||| || ||||||| | | || |||| ||| || |||||||| Sbjct 393035 TCCGCACGATCGTCCGCCTGCGCAAGAAGGATGCG-AACGAGCGCAAGGAAGAGGAAGCG 393093 Query 10924 GTCCTCGAACTGTAC 10938 ||||||| |||||| Sbjct 393094 ATCCTCGAGCTGTAC 393108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190584004375044